VIMSS220959 has 446 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.3e-57 179.7 0.1 3.2e-57 179.2 0.1 1.2 1 VIMSS220959
Domain annotation for each sequence (and alignments):
>> VIMSS220959
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 179.2 0.1 3.2e-57 3.2e-57 2 172 .. 21 207 .. 19 214 .. 0.97
Alignments for each domain:
== domain 1 score: 179.2 bits; conditional E-value: 3.2e-57
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae.............galav 86
+a+ll+ll++ff+aaE+A+v+l+ +r+e+ aek+ ++ + l k++++++ +Ls++++g+tl++++l+++++++fa+ll++ +a+++
VIMSS220959 21 FAFLLVLLNGFFVAAEFAMVKLRATRVEAIAEKHGWRGNILRKVHNQLDAYLSACQLGITLASLGLGWVGEPAFAHLLEPllaylgvdsaelvKAISF 118
567777******************************************************************************************** PP
CNNM 87 viatvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv...kkeeepavteeelrslveese 172
++a++++++l++v+GE++Pk++a++++e ++l++a+pl+++++ +yP+++lln++an ilr+ G + ++e+ +++eel+ ++ +s+
VIMSS220959 119 FVAFFVISYLHIVVGELAPKSWAIRKPELLSLWTAVPLYLFYWAMYPAIYLLNASANTILRIAGQgepGPHHEHHYSREELKLILHSSR 207
*******************************************************************99***************99987 PP
Or compare VIMSS220959 to CDD or PaperBLAST