VIMSS244046 has 341 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-45 140.5 4.6 3.5e-45 140.0 4.6 1.2 1 VIMSS244046
Domain annotation for each sequence (and alignments):
>> VIMSS244046
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 140.0 4.6 3.5e-45 3.5e-45 5 178 .. 11 198 .. 7 201 .. 0.97
Alignments for each domain:
== domain 1 score: 140.0 bits; conditional E-value: 3.5e-45
CNNM 5 lllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae............galavviat 90
l ll +aff++aE+A++s++++++e +a++g+k+a+ l+ l++ +++++t ++g+t+ +++l+a+a++++a+l+++ +++a++ia+
VIMSS244046 11 LTLLTNAFFVGAEFAMISVRRSQIEPRAKTGDKRARMTLWGLQHISQMMATAQLGITVSSLVLGAVAEPAIAHLMEPvfeavhmphalvHPVAFAIAL 108
66789********************************************************************************************* PP
CNNM 91 vivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveeseeeGvie 178
++ t+l++++GE++Pk++al+ + ++al++ ppl l + l+P+v+ +n++an +l+ll+v k+e e ++t+++l +v + e G +
VIMSS244046 109 TLATYLHMLIGEMIPKNIALAAPATTALLLGPPLVALTRALKPVVFGINAFANTLLKLLRVepKDEVEAVFTDDQLARMVVDASEAGLLT 198
***********************************************************************************9999875 PP
Or compare VIMSS244046 to CDD or PaperBLAST