VIMSS244047 has 459 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.1e-41 125.6 5.4 1.3e-40 125.1 5.4 1.2 1 VIMSS244047
Domain annotation for each sequence (and alignments):
>> VIMSS244047
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 125.1 5.4 1.3e-40 1.3e-40 1 180 [. 8 200 .. 7 201 .. 0.93
Alignments for each domain:
== domain 1 score: 125.1 bits; conditional E-value: 1.3e-40
CNNM 1 liallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae...........galavv 87
l+alll l+ a+f+aaE++l+++ +++le ae+g++ga+ +l+ ++ ++ Ls ++g+t++++++++la++ +a ll +
VIMSS244047 8 LLALLLTLACALFVAAEFSLTTVERSDLERAAESGERGADGALRAVRSLTLQLSGAQLGITVTSLVIGMLAEPSIAVLLRGpltamglggaaS----T 101
4677888************************************************************************989******65444....5 PP
CNNM 88 iat....vivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveeseeeGviee 179
+at v+ t++++v+GE++Pk++a+ +++++a +va+p r + + + P+++ ln an ++r +G +e +++ + eel +l ++s++eG++e+
VIMSS244047 102 VATllgvVLSTVVLMVVGELVPKNWAISRPLAVAKVVAGPQRGFTTAFGPFIRHLNNTANRFVRRFGLepAEELASVRSAEELVALAQHSAAEGALEA 199
5544552666***********************************************************99999*********************997 PP
CNNM 180 e 180
+
VIMSS244047 200 D 200
6 PP
Or compare VIMSS244047 to CDD or PaperBLAST