VIMSS304897 has 398 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-50 156.1 2.1 5.4e-50 155.6 2.1 1.1 1 VIMSS304897
Domain annotation for each sequence (and alignments):
>> VIMSS304897
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 155.6 2.1 5.4e-50 5.4e-50 21 174 .. 1 154 [. 1 159 [. 0.97
Alignments for each domain:
== domain 1 score: 155.6 bits; conditional E-value: 5.4e-50
CNNM 21 vslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtllilvfGEilPktlalknaekial 118
++l+++rl+++a++gn++akr++kll++p+rl+s +lign+lvnil+sal+t + ++l+ g+++v+iat+++t+++lvf+E+lPkt+a+ ++ek+a
VIMSS304897 1 MTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLY--GDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAY 96
689********************************************************..79*********************************** PP
CNNM 119 avapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveeseee 174
++ +l l++l++Plvwlln+++++++r++G+ + +++eelr++v es+++
VIMSS304897 97 PSSFLLAPLQVLMMPLVWLLNAITRILMRMMGIktDIVVSGSLSKEELRTIVHESRSQ 154
*********************************877778999************9986 PP
Or compare VIMSS304897 to CDD or PaperBLAST