VIMSS341424 has 375 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-33 101.2 3.6 4.3e-33 100.6 3.6 1.3 1 VIMSS341424
Domain annotation for each sequence (and alignments):
>> VIMSS341424
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 100.6 3.6 4.3e-33 4.3e-33 4 180 .. 9 177 .. 6 178 .. 0.95
Alignments for each domain:
== domain 1 score: 100.6 bits; conditional E-value: 4.3e-33
CNNM 4 llllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtllilvfG 101
+ + +s ++s +E+ l+s+s++ + +l ++g++ a++l kl+++ +r L+++l +nt++ ++ +a a+a +a ++ g+ a+ i+ +++tl+ilv++
VIMSS341424 9 SIAIGISFICSVLEAVLLSISPSYIAQLNQQGHPAAEQLSKLKSDIDRPLASILTLNTIAHTIGAATAGAQAAVVF--GSEALGIFSAVLTLAILVLS 104
577899**********************************************************************..56789999999********* PP
CNNM 102 EilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseeeGvieee 180
Ei+Pkt+++ + ++a a a+ lr+ ++ l+P+vw+ +++++ + +++e ++el ++ +++e+G++ e
VIMSS341424 105 EIVPKTIGATYWRQLAPAAAVSLRWMVWALTPFVWFSEQITKRLA------RNHEAPKMRDELSAMAILARESGEFAEG 177
*********************************************......7888888899*************99775 PP
Or compare VIMSS341424 to CDD or PaperBLAST