VIMSS370842 has 412 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-29 89.0 1.1 2.5e-29 88.3 1.1 1.3 1 VIMSS370842
Domain annotation for each sequence (and alignments):
>> VIMSS370842
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 88.3 1.1 2.5e-29 2.5e-29 2 181 .] 9 182 .. 8 182 .. 0.89
Alignments for each domain:
== domain 1 score: 88.3 bits; conditional E-value: 2.5e-29
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatviv.tllil 98
++++++l+s+f s + +Al+sl ++ + + +++nk+ +++ +l++ p++lL+tl++ +ni+ ++++l+ + a+++ tv v l+l
VIMSS370842 9 LTAVFVLCSGFISLSHIALFSLPSSLIAHYNHSKNKQLRQIANLMAYPNHLLITLVFFDIGINIGVQNCIATLVG------DSASFLMTVGVpLALTL 100
5778899*************************************************9999999987776655544......456789999999***** PP
CNNM 99 vfGEilPktlalknaekialavapplrvlsillyPlv.wllnllanlilrllGvkkeeepavteeelrslveeseeeGvieeee 181
v+GEi+Pk +a+ ++ +ia +v p++ v + ++P+ w ++ + +i ++l ++e+++++++el++++++ + Gv+++ee
VIMSS370842 101 VLGEIIPKVIAIPYNVRIARLVTPIIFVSTKSFRPIFdWAISGINFIIQKML--VHQEGDFIQPQELKEVLRSCKDFGVVNHEE 182
***********************************99677666655555444..89************************9997 PP
Or compare VIMSS370842 to CDD or PaperBLAST