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Align VIMSS4041971 to PF01595 (CNNM)

VIMSS4041971 has 436 amino acids

Query:       CNNM  [M=181]
Accession:   PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
      9e-57  177.7   1.7    1.2e-56  177.3   1.7    1.2  1  VIMSS4041971  


Domain annotation for each sequence (and alignments):
>> VIMSS4041971  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  177.3   1.7   1.2e-56   1.2e-56       2     181 .]       8     200 ..       7     200 .. 0.99

  Alignments for each domain:
  == domain 1  score: 177.3 bits;  conditional E-value: 1.2e-56
          CNNM   2 iallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae............galav 86 
                   ++++l++++aff+a+E+A+v+++k ++ +l+++++++ak ++k+++n + +L+++++gntl+ ++++++++a++  +l++            +++++
  VIMSS4041971   8 FVIFLIAATAFFVASEFAIVAIRKPTVLQLVASEDPRAKYVKKVTSNMNDYLAACQLGNTLAALAMGWVGEATMRGWLEPlflmlpvpesveKPISI 104
                   569********************************************************************************************** PP

          CNNM  87 viatvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv.kkeeepavteeelrslveeseeeGvieeee 181
                   +++++++t+l +v+GE++Pkt+ ++  ek+al++a+pl ++++l++Pl wlln +anli+r++Gv ++ +++++t+ el+ ++e s+++G ++++e
  VIMSS4041971 105 FVSFILITFLNVVLGELAPKTFTIQSTEKVALFIARPLVYWYRLTFPLNWLLNNSANLITRMFGVkQTVDADQMTPTELKIIFEDSYRQGLLNPQE 200
                   ********************************************************************************************9987 PP



Or compare VIMSS4041971 to CDD or PaperBLAST