VIMSS521402 has 442 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.4e-33 99.5 4.6 1.3e-32 99.0 4.6 1.2 1 VIMSS521402
Domain annotation for each sequence (and alignments):
>> VIMSS521402
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 99.0 4.6 1.3e-32 1.3e-32 1 181 [] 8 187 .. 8 187 .. 0.96
Alignments for each domain:
== domain 1 score: 99.0 bits; conditional E-value: 1.3e-32
CNNM 1 liallllllsaffsaaEtAlvslsklrleelaekgnkgakr.llkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtlli 97
li+l+ ll+s++ +E+A++s+s +r+e+ +++++ +a+r ll+++e++ + ++ l+++ t+ + ++++a l el+ ++++av++a+v v l++
VIMSS521402 8 LITLAALLCSGLLGTVEAAVSSISLARVEQIDKDKETRASRvLLNVVEKRAEHINLLVLLKTFLDVTAAVFAVMLTLELIDNETWAVTAAIVGVALVT 105
689999*****************************977777699****************************************************** PP
CNNM 98 lvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseeeGvieeee 181
+ + ++ +t+++kn+++++l +a +l+ l +ll P+++ll ++ n+i G + +++p+ te elr++v++++e+Gv+e ee
VIMSS521402 106 FTVVGVFSRTVGRKNPYTVSLSSAFLLSALAKLLGPIARLLIRIGNIIA--PGPGFRDGPYNTEVELREMVDIAQEHGVVEIEE 187
*************************************************..45599************************9876 PP
Or compare VIMSS521402 to CDD or PaperBLAST