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Align VIMSS5916320 to PF01595 (CNNM)

VIMSS5916320 has 467 amino acids

Query:       CNNM  [M=181]
Accession:   PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    2.1e-40  124.4   1.9    3.2e-40  123.8   1.9    1.2  1  VIMSS5916320  


Domain annotation for each sequence (and alignments):
>> VIMSS5916320  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  123.8   1.9   3.2e-40   3.2e-40       5     179 ..      17     205 ..      13     207 .. 0.96

  Alignments for each domain:
  == domain 1  score: 123.8 bits;  conditional E-value: 3.2e-40
          CNNM   5 lllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae............galavvia 89 
                   ++++l++ f+a E+A++s+++++l++la++g+k+a+r+l+++++ + +Ls  ++g+t++ +l + +a++l+ ++l+              +++ v+a
  VIMSS5916320  17 VIIVLNGYFVAQEFAYMSVDRNELRALADSGDKKARRALSITKRTSFMLSGAQLGITVTGLLVGFVAEPLVGNALGVllggvgvpaavsISVGTVLA 113
                   6789***********************************************************************99********999988899999 PP

          CNNM  90 tvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveeseeeGviee 179
                   ++i t++ ++fGE++Pk++ l+ ++k ala+ap + +  +l   l+ +++  +n++lrl+++   ++ ++ +t ++l ++v++s+ +Gv+++
  VIMSS5916320 114 LAISTVVQMIFGELFPKNYTLATPLKSALALAPSTTWYLKLAGWLITFFDFASNALLRLFRIepVEDVDSSATAQDLPHIVASSRDSGVLNN 205
                   9999***********************************************************999999********************986 PP



Or compare VIMSS5916320 to CDD or PaperBLAST