VIMSS5917390 has 440 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-36 110.9 3.3 4.1e-36 110.4 3.3 1.2 1 VIMSS5917390
Domain annotation for each sequence (and alignments):
>> VIMSS5917390
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 110.4 3.3 4.1e-36 4.1e-36 1 181 [] 10 188 .. 10 188 .. 0.97
Alignments for each domain:
== domain 1 score: 110.4 bits; conditional E-value: 4.1e-36
CNNM 1 liallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellaegalavviatvivtlli 97
+++++ ll+s++ a+E Al+s+s++r+e++ +++ +g++ ll++++++ ++ l++++tl +++++a+a++++++ a+++v+a+v+v+ll+
VIMSS5917390 10 IATVVALLFSGLLGAVESALSSVSRARVEQMLKDEASGSASLLRVIDERALHINMLIMLRTLLDASAAVFAGAIAVNVMDSWAWGIVLAIVVVSLLT 106
5789999************************************************************************9999************** PP
CNNM 98 lvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseeeGvieeee 181
+ + ++ +t+++kn++++ l++a++l+ l ++l P+++ l ++ n+i G + +++p++te elr++v++++e+G++e ee
VIMSS5917390 107 FAVVGVFGRTVGRKNPYSVMLRSAVVLSGLAKILGPIARGLIWIGNIIA--PGPGFRNGPYATEVELREMVDIAQEHGIVEIEE 188
*************************************************..45599***********************99876 PP
Or compare VIMSS5917390 to CDD or PaperBLAST