VIMSS745260 has 446 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.5e-50 155.9 3.3 6.5e-50 155.4 3.3 1.1 1 VIMSS745260
Domain annotation for each sequence (and alignments):
>> VIMSS745260
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 155.4 3.3 6.5e-50 6.5e-50 2 173 .. 9 195 .. 8 202 .. 0.96
Alignments for each domain:
== domain 1 score: 155.4 bits; conditional E-value: 6.5e-50
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae.............galav 86
alll++l++ff+aaE++lv+l+ +r+++la+++ + + l ++++++ +Ls++++g+tl++++l+++++++fa ll++ + +++
VIMSS745260 9 GALLLVALNGFFVAAEFGLVKLRATRVKTLARQHGLRGRILRIVHARLDAYLSACQLGITLASLGLGWIGEPAFAALLSPvlafagveseklvHLISL 106
679999***************************************************************************************999** PP
CNNM 87 viatvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveesee 173
v a+ ++++l++v+GE++Pk++a++ aek+ l+va pl+ +++ +yP++w+ln +an++lrl G + + ++ +el+ ++++ ++
VIMSS745260 107 VFAFSVISFLHIVVGELAPKSMAIRQAEKTGLWVALPLYAFYWAMYPAIWVLNTSANAVLRLAGLsaDHGGDAHYSTDELKLILRSRRN 195
*****************************************************************9877888899********998765 PP
Or compare VIMSS745260 to CDD or PaperBLAST