VIMSS7609146 has 444 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.6e-40 123.6 2.1 5e-40 123.2 2.1 1.2 1 VIMSS7609146
Domain annotation for each sequence (and alignments):
>> VIMSS7609146
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 123.2 2.1 5e-40 5e-40 9 179 .. 2 181 .. 1 183 [. 0.93
Alignments for each domain:
== domain 1 score: 123.2 bits; conditional E-value: 5e-40
CNNM 9 lsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae.....galavviatvivtllilvf 100
lsa+fs++EtA++s+++++l l+++++ + +k e+++ ++ tll+gn++vni++s+++t+++++l +++ v+i+t+ +t+li++f
VIMSS7609146 2 LSALFSGSETAYTSIDDVTLMRLVREKK-IKEEDKKYWEKSSSMIPTLLVGNNIVNISASSIITVFAVRLADIlphvsTNVMVTISTATITILIIIF 97
8***********************9985.555568999******************************9988799***99***************** PP
CNNM 101 GEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv.....kkeeepavteeelrslveeseeeGviee 179
GEilPk l++ naek+ ++ +++++++++++P+++l+++++++i++ + ++++ + e++ +++ ++++eG+i+e
VIMSS7609146 98 GEILPKVLMRVNAEKMMPYLLYFMKFCHFIFKPITFLMDKVTTFIMNYFVPkrlrdAEKRSALSSMEDITTIIHLGHKEGIIKE 181
**********************************************99988889977777777889***************987 PP
Or compare VIMSS7609146 to CDD or PaperBLAST