VIMSS858660 has 432 amino acids
Query: CNNM [M=181]
Accession: PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-48 150.6 5.8 1.9e-48 150.6 5.8 1.6 2 VIMSS858660
Domain annotation for each sequence (and alignments):
>> VIMSS858660
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 150.6 5.8 1.9e-48 1.9e-48 2 181 .] 11 201 .. 10 201 .. 0.98
2 ? -2.4 0.0 0.17 0.17 86 104 .. 322 341 .. 305 353 .. 0.60
Alignments for each domain:
== domain 1 score: 150.6 bits; conditional E-value: 1.9e-48
CNNM 2 iallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae...........galavvi 88
++++l+l sa++s+aE++l s +kl+l++la+kg+ +a ++lkl e+p r++++++i+ ++v il + +++++++ ++a +++a++i
VIMSS858660 11 AIVALILSSAVVSSAEISLASSRKLKLQSLANKGDVRALQVLKLQEHPGRFITVVQILLNMVAILGGGIGESALSPYIADilnrsfegswiEPTASTI 108
689***************************************************************************99***********99***** PP
CNNM 89 atvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGvkkeeepavteeelrslveeseeeGvieeee 181
a+++vt+l+++f++++Pk++a+ ++e +al v++++++ +++++Plvw+++ +an+++rl+++++ +e+ +t+e++ ++ve+++e Gv++ +e
VIMSS858660 109 AFILVTCLFILFADLIPKRIAITYPEMVALSVVGIMNFSMYVFKPLVWFFDTIANVFFRLFRISTVREDGMTSEDIFAVVEAGAEAGVLKTQE 201
*****************************************************************************************9887 PP
== domain 2 score: -2.4 bits; conditional E-value: 0.17
CNNM 86 vviatviv.tllilvfGEil 104
+v+ +v + ++ +v GE++
VIMSS858660 322 LVVGIVTLnDVMSIVMGELV 341
33333333344444444443 PP
Or compare VIMSS858660 to CDD or PaperBLAST