PaperBLAST – Find papers about a protein or its homologs

 

Align WP_010734371.1 to PF01595 (CNNM)

WP_010734371.1 has 432 amino acids

Query:       CNNM  [M=181]
Accession:   PF01595.24
Description: Cyclin M transmembrane N-terminal domain
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------       -----------
    1.8e-50  157.2   2.1    2.4e-50  156.8   2.1    1.2  1  WP_010734371.1  


Domain annotation for each sequence (and alignments):
>> WP_010734371.1  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  156.8   2.1   2.4e-50   2.4e-50       2     181 .]       7     200 ..       5     200 .. 0.98

  Alignments for each domain:
  == domain 1  score: 156.8 bits;  conditional E-value: 2.4e-50
            CNNM   2 iallllllsaffsaaEtAlvslsklrleelaekgnkgakrllkllenperlLstlligntlvnillsalatalfaellae............gal 84 
                     i++l+++++aff+a+E+Alv+++++rle+l ++  k+ak +l+++++++ +Ls+ ++g+tl+ ++++++++  +a ll++             ++
  WP_010734371.1   7 ILFLMIAITAFFVASEFALVKIRRSRLEQLEKDDVKNAKLALHVTHHLDDYLSASQLGITLTGLIIGWVGEGSVAALLEPwigqlpigrgisATI 101
                     667778************************************************************************************99999 PP

            CNNM  85 avviatvivtllilvfGEilPktlalknaekialavapplrvlsillyPlvwllnllanlilrllGv..kkeeepavteeelrslveeseeeGvi 177
                     +v++ +++vt++ +v+GE+lPk++ + n e+++l+v++pl+++++ ++P++w+ln++a  + +llGv   +e e+++++eel  +  +s+++G++
  WP_010734371.1 102 SVALGFILVTYVDVVVGELLPKSYSIVNTEQVVLFVVRPLHYFYLAMFPFIWVLNHSAASLGKLLGVklVSEGEETLSQEELTLVALNSYQQGEL 196
                     9999******************************************************************************************* PP

            CNNM 178 eeee 181
                      ++e
  WP_010734371.1 197 TKDE 200
                     9987 PP



Or compare WP_010734371.1 to CDD or PaperBLAST