VIMSS239629 has 358 amino acids
Query: BpsA_C [M=243]
Accession: PF01861.20
Description: Branched-chain polyamine synthase A C-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.2e-95 304.0 1.3 4.4e-95 303.6 1.3 1.2 1 VIMSS239629
Domain annotation for each sequence (and alignments):
>> VIMSS239629
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 303.6 1.3 4.4e-95 4.4e-95 1 241 [. 110 350 .. 110 352 .. 0.98
Alignments for each domain:
== domain 1 score: 303.6 bits; conditional E-value: 4.4e-95
BpsA_C 1 dllekfreiakdRPeaieeyDqgfvtpettvaRvallyerGDLegkeilvlGdDDLtslalaLtglpkkvvvvDiDeRlikfiervakelglkieaiv 98
dl++kf e++ dRP+ai +yDqgfvt +tt+aR+al+ erGDLegk+++vlGdDDL+s+a+ L+++pk++vv++iD+Rl+++i+r akel+l+iea++
VIMSS239629 110 DLIKKFDEVTEDRPKAISDYDQGFVTTNTTIARIALMAERGDLEGKKLFVLGDDDLVSIAAGLSQMPKEIVVLEIDDRLVDYINRKAKELNLPIEAMK 207
789*********************************************************************************************** PP
BpsA_C 99 yDlrkplpeelkekFdvfitDPpetvealkaFlgRGiaaLkgegcagYlgltrressldkWkeiqrlll.emgvvitdlirnFneYenweykeetraa 195
yD r+ lpe++ Fd+fitDPpetv+al + +gRGi++LkgegcagY+g+t e+sl+kW+ +q++l+ ++ v itd+i +F +Y+nw+y +t
VIMSS239629 208 YDFRDKLPEKYIGYFDTFITDPPETVDALELTIGRGISTLKGEGCAGYFGVTLIEASLEKWNIFQQILTsKFKVAITDIIYDFSHYVNWDYLLTTVGK 305
*********************************************************************9**************************** PP
BpsA_C 196 kllpvkkkpekiwyksalfrietlkgkrkveeevkkveelykdees 241
v+ +p+ +wy+s ++rietlk+++++e+ k v e+y dee+
VIMSS239629 306 PYDFVQVEPKLNWYRSSMYRIETLKDSKGIENVYKPV-EIYVDEEA 350
******************************9988875.68888886 PP
Or compare VIMSS239629 to CDD or PaperBLAST