VIMSS533870 has 390 amino acids
Query: BpsA_C [M=243]
Accession: PF01861.20
Description: Branched-chain polyamine synthase A C-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.7e-79 251.9 0.0 3.8e-79 251.4 0.0 1.2 1 VIMSS533870
Domain annotation for each sequence (and alignments):
>> VIMSS533870
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 251.4 0.0 3.8e-79 3.8e-79 2 242 .. 129 377 .. 128 378 .. 0.98
Alignments for each domain:
== domain 1 score: 251.4 bits; conditional E-value: 3.8e-79
BpsA_C 2 llekfreiakdRPeaieeyDqgfvtpettvaRvallyerGDLegkeilvlGdDDLtslalaLtglpkkvvvvDiDeRlikfiervakelglkieaivy 99
+l+k + +ak RP++ + +Dq+f+tpet++aR+a++ +rGDLegk++l++GdDDL s+++a+tgl +vvv+DiD+Rl+k+i +v+k+++l+i+++++
VIMSS533870 129 ILKKHKTYAKLRPQVNTMIDQSFATPETATARAAIMADRGDLEGKRVLFVGDDDLASIPTAMTGLCSEVVVLDIDDRLLKLISEVSKKENLNIRTVKW 226
899*********************************************************************************************** PP
BpsA_C 100 DlrkplpeelkekFdvfitDPpetvealkaFlgRGiaaLkgegcagYlgltrressldkWkeiqrlllemgvvitdlirnFneYenweykeetraakl 197
D ++ lp e+++kFd+++tDPp+t+++ +F++RGi+aL+++g + Yl++++++ ++++ e+q+ + +m+++i +li+ Fn Ye+ e++ +t++ ++
VIMSS533870 227 DFKNELPSEFVNKFDTIFTDPPYTLNGAVLFMSRGIEALGDNG-ILYLAFSHKP--VEEYIELQKSINNMNFLIYELIPGFNFYEGTEIIGNTTFLAR 321
******************************************9.99********..****************************************** PP
BpsA_C 198 lpvkk......kpekiwyksalfrietlk....gk.rkveeevkkveelykdeess 242
l+ k+ ++eki++ ++ +++++ +k ++v+++vk+ e+l ++++++
VIMSS533870 322 LVGKNlkkievNSEKIYTGELKPTLRYYQcmncKKiHEVGNKVKRIEDLTCECGGK 377
****9999*999***************998887445999**************997 PP
Or compare VIMSS533870 to CDD or PaperBLAST