VIMSS939921 has 351 amino acids
Query: BpsA_C [M=243]
Accession: PF01861.20
Description: Branched-chain polyamine synthase A C-terminal domain
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.3e-125 401.9 0.1 5.4e-125 401.5 0.1 1.1 1 VIMSS939921
Domain annotation for each sequence (and alignments):
>> VIMSS939921
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 401.5 0.1 5.4e-125 5.4e-125 1 243 [] 106 350 .. 106 350 .. 0.99
Alignments for each domain:
== domain 1 score: 401.5 bits; conditional E-value: 5.4e-125
BpsA_C 1 dllekfreiakdRPeaieeyDqgfvtpettvaRvallyerGDLegkeilvlGdDDLtslalaLtglpkkvvvvDiDeRlikfiervakelglk.ieai 97
+lle+f+ei++dRPe+ +++Dq++vtpettvaRval+++rGDLe+ke++vlGdDDLts+al+L+glpk+++v+DiDeRl+kfie++a+e+g++ ie++
VIMSS939921 106 ELLEQFKEITRDRPEPAHQFDQAYVTPETTVARVALMHSRGDLENKEVFVLGDDDLTSVALMLSGLPKRIAVLDIDERLTKFIEKAADEIGYEnIEIF 203
689*********************************************************************************************** PP
BpsA_C 98 vyDlrkplpeelkekFdvfitDPpetvealkaFlgRGiaaLkgegcagYlgltrressldkWkeiqrlll.emgvvitdlirnFneYenweykeetra 194
++Dlrkplp+++++kFd+fitDPpetvea++aF+gRGia+Lkg gcagY+g+trressldkW+eiqr+ll e+gvvitd+irnFneY+nw+y eetra
VIMSS939921 204 TFDLRKPLPDYALHKFDTFITDPPETVEAIRAFVGRGIATLKGPGCAGYFGITRRESSLDKWREIQRVLLnEFGVVITDIIRNFNEYVNWGYVEETRA 301
**********************************************************************9*************************** PP
BpsA_C 195 akllpvkkkpekiwyksalfrietlkgkrkveeevkkveelykdeesst 243
++llp+k kp ++wyks++fri+tl+g++++e+e++ +ely deesst
VIMSS939921 302 WRLLPIKVKPSYNWYKSYMFRIQTLEGSKGFEDEITVGQELYDDEESST 350
**********************************************986 PP
Or compare VIMSS939921 to CDD or PaperBLAST