NP_001184943.1 has 1315 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7e-12 31.9 0.0 1.8e-11 30.6 0.0 1.7 1 NP_001184943.1
Domain annotation for each sequence (and alignments):
>> NP_001184943.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 30.6 0.0 1.8e-11 1.8e-11 16 161 .. 488 660 .. 482 661 .. 0.71
Alignments for each domain:
== domain 1 score: 30.6 bits; conditional E-value: 1.8e-11
Cas_Cas4 16 wlisheitleeesetvelGkllheesyerek....kevelse...............sikiDvvekekeklvvvEvKkskkk....eeaaklQll 87
w+ + +++ ++e ++v++G ++ +++ + ++ +e+++ ++ D+ + +ek++++E K++k+ + ++ +Q+
NP_001184943.1 488 WIEHFRYSKDSEVSKVDFGSTIGKKAVKVSEvidiEEMSW-ApkyglkgmidasvrvIVESDMNT-VNEKIMPLEFKSGKAPsgqsSIEHSAQVI 580
7777788888888899999999886666643355555555.134677333333333344444444.7788999*******9866667889***** PP
Cas_Cas4 88 yYlllLe.kkgveikeGvleypkekkreevelteedreel....ekaikeieeiisse.kppevkkkkiCkkCayaelCl 161
Y ll+ + +i++G l+y+++ +++ +++++ d l ++ +++i ++++ pp + +iC++C ++C
NP_001184943.1 581 LYTLLMSeRYLKHIDNGLLYYLQSDQTQGISVQRSDLVGLiirrNELANDILVASTTQqLPPMLRNPNICRNCRHLDVCT 660
*******555667999****************998865442222345555555555442778888889***********7 PP
Or compare NP_001184943.1 to CDD or PaperBLAST