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Align SwissProt::Q1CW50 to PF01930 (Cas_Cas4)

SwissProt::Q1CW50 has 568 amino acids

Query:       Cas_Cas4  [M=161]
Accession:   PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence          Description
    ------- ------ -----    ------- ------ -----   ---- --  --------          -----------
    6.9e-20   57.9   0.0      1e-19   57.4   0.0    1.2  1  SwissProt::Q1CW50  


Domain annotation for each sequence (and alignments):
>> SwissProt::Q1CW50  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   57.4   0.0     1e-19     1e-19       5     160 ..      37     208 ..      33     209 .. 0.87

  Alignments for each domain:
  == domain 1  score: 57.4 bits;  conditional E-value: 1e-19
           Cas_Cas4   5 inyyliCkrklwlfsh.eitmeeeselvelGkliheesykr.ekkevei.se....sikiDvvkkekeklvvvevKkskki........eea 81 
                        ++ +++C+r ++l +  e+++++  ++v +G+ +h +  ++ e+ e+e+ se    ++++D+vk+++++lvv+e+K++++          ++
  SwissProt::Q1CW50  37 LHALAYCERLFYLEEVeELRVAD--AAVFAGRRLHVQLQEEgEHVELELaSEalglHGRVDAVKTREGTLVVYEHKRGRHApggdapeaWPS 126
                        67899********9993444444..59999*****987777566788886669999***********************9999999875566 PP

           Cas_Cas4  82 aklQllyYlllLekk..gieakGvleypkekkreevelteedreeleeaikeieeiisse.kppepkkkkiCkkCayaelCl 160
                        ++lQ  +Y+ll+e++  g  ++  ++y+++  +++  l+++ r ++  a+ +++ + +s  +pp ++++++C kC++a +Cl
  SwissProt::Q1CW50 127 DRLQAGAYALLVEERfpGAPVECRVRYHQTDTTVRFPLDAALRGAVVAAVARARLLRASReRPPVTQEERKCAKCSLAPVCL 208
                        7************655599999********************************997654499******************8 PP



Or compare SwissProt::Q1CW50 to CDD or PaperBLAST