VIMSS106120 has 201 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.7e-36 110.5 0.3 5.6e-36 110.2 0.3 1.1 1 VIMSS106120
Domain annotation for each sequence (and alignments):
>> VIMSS106120
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 110.2 0.3 5.6e-36 5.6e-36 2 160 .. 21 190 .. 20 191 .. 0.89
Alignments for each domain:
== domain 1 score: 110.2 bits; conditional E-value: 5.6e-36
Cas_Cas4 2 gvkinyyliCkrklwlfsheitmeeeselvelGkliheesykr...ek........keveise...sikiDvvkkekeklvvvevKkskkieeaaklQ 85
g++i+++++C++ + + s+++t + +++++e G+++++++ + + k + ++ D+v + +++v+ +vK+++k ++++klQ
VIMSS106120 21 GITIKHFAYCPQIVRIESMGFTERVSEAMIE-GEQVEKDKVMNflyATlkplnvvgKPIFR-YgdlIGSPDYVLIYPNHWVPLDVKSGRK-RYDHKLQ 115
89*********************99999999.******55444332114133345555555.14579*********************99.9****** PP
Cas_Cas4 86 llyYlllLekkgieak.GvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelCl 160
++yYl+l++++gi++k G l+y+++k+++++e++ ++++ +e+++++i+e i+ k++ +++ ++C +C ++ +C
VIMSS106120 116 MKYYLYLMDMNGINVKeGLLYYVSLKEMVRLEYNYAEKRYVEKVLSKIREAING-KVRVVQDARKCYNCGFFVYCK 190
*****************************************************9.9*******************6 PP
Or compare VIMSS106120 to CDD or PaperBLAST