VIMSS106120 has 201 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.8e-37 114.5 0.2 3.3e-37 114.3 0.2 1.0 1 VIMSS106120
Domain annotation for each sequence (and alignments):
>> VIMSS106120
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 114.3 0.2 3.3e-37 3.3e-37 2 161 .. 21 190 .. 20 191 .. 0.89
Alignments for each domain:
== domain 1 score: 114.3 bits; conditional E-value: 3.3e-37
Cas_Cas4 2 gtkinyyliCkrklwlisheitleeesetvelGkllhe.....esyerek........kevelse...sikiDvvekekeklvvvEvKkskkkeeaak 83
g++i+++++C++ + + s+++t + +++++e G+++++ y+ + k + + ++ D+v +++++v+++vK+++k ++++k
VIMSS106120 21 GITIKHFAYCPQIVRIESMGFTERVSEAMIE-GEQVEKdkvmnFLYA--TlkplnvvgKPIFR-YgdlIGSPDYVLIYPNHWVPLDVKSGRK-RYDHK 113
899**********************999999.******655552222..13133345655555.1458**********************99.9**** PP
Cas_Cas4 84 lQllyYlllLekkgveikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelCl 161
lQ++yYl+l++++g+++keG l+y+++k+++++e++ ++++ +ek++++i+e i+ k+++v++ ++C +C ++ +C
VIMSS106120 114 LQMKYYLYLMDMNGINVKEGLLYYVSLKEMVRLEYNYAEKRYVEKVLSKIREAING-KVRVVQDARKCYNCGFFVYCK 190
*******************************************************9.9*******************7 PP
Or compare VIMSS106120 to CDD or PaperBLAST