VIMSS106172 has 175 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-19 57.2 0.2 1.4e-19 57.0 0.2 1.1 1 VIMSS106172
Domain annotation for each sequence (and alignments):
>> VIMSS106172
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 57.0 0.2 1.4e-19 1.4e-19 2 161 .. 4 170 .. 3 171 .. 0.79
Alignments for each domain:
== domain 1 score: 57.0 bits; conditional E-value: 1.4e-19
Cas_Cas4 2 gtkinyyliCkrklwlish.e.itleeesetvelGkllhe..esyerek.kevel.se....sikiDvvekekeklvvvEvKkskkkeeaa.klQlly 88
+t+++ y Ck w+ ++ + ++ +s++++ l+e + + + k ev+l ++ ++ +Dv++ + v+E+K ++ +++ ++Qll+
VIMSS106172 4 VTDLKDYSLCKVIPWIRKKmGwKEPITNSQRIAKNVNLKEivRDFPEPKyYEVHLrDKdsglNGIVDVLT----EDSVIEIKAFYRRFYNHfRIQLLA 97
5677888888888887655321223345555553334444443333322489999766889999999999....8899******************** PP
Cas_Cas4 89 YlllLekkgveikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkk.iCkkCayaelCl 161
Y++l e++g ++++ vl + ke+ + ++e+ +e+ e + k+++e e ++ ++pp+v+ ++ +Ck+C y+ +C
VIMSS106172 98 YAYLAERNGFRVRNTVLLMNKER-KINIEVRKEHVEYIGKVVNELVESLEDDSPPVVNPSPlLCKACQYRRVCS 170
*************7777666655.578*********************************989**********5 PP
Or compare VIMSS106172 to CDD or PaperBLAST