VIMSS106172 has 175 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.7e-19 54.9 0.2 6.7e-19 54.7 0.2 1.1 1 VIMSS106172
Domain annotation for each sequence (and alignments):
>> VIMSS106172
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 54.7 0.2 6.7e-19 6.7e-19 3 160 .. 5 170 .. 3 171 .. 0.78
Alignments for each domain:
== domain 1 score: 54.7 bits; conditional E-value: 6.7e-19
Cas_Cas4 3 vkinyyliCkrklwlfsh..eitmeeeselvelGklihe..esykr.ekkevei.se....sikiDvvkkekeklvvvevKkskkieeaa.klQllyY 89
++++ y Ck w+ ++ ++ +s++++ ++e + + + + ev++ ++ ++ +Dv++ + v+e+K + +++ ++Qll+Y
VIMSS106172 5 TDLKDYSLCKVIPWIRKKmgWKEPITNSQRIAKNVNLKEivRDFPEpKYYEVHLrDKdsglNGIVDVLT----EDSVIEIKAFYRRFYNHfRIQLLAY 98
677778888888887665322233345555553333344432233324488999655777888899999....8899*********99999******* PP
Cas_Cas4 90 lllLekkgieakGvleypkekkreevelteedreeleeaikeieeiissekppepkkkk.iCkkCayaelCl 160
++l e++g +++ ++ ++++ ++ ++e+ +e+ e + ++++e e ++ ++pp ++ ++ Ck+C y+ +C
VIMSS106172 99 AYLAERNGFRVRNTVLLMNKERKINIEVRKEHVEYIGKVVNELVESLEDDSPPVVNPSPlLCKACQYRRVCS 170
************7777777777899*********************************988**********5 PP
Or compare VIMSS106172 to CDD or PaperBLAST