VIMSS1077693 has 920 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-12 33.5 0.1 4e-11 29.5 0.0 2.6 3 VIMSS1077693
Domain annotation for each sequence (and alignments):
>> VIMSS1077693
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.8 0.0 0.66 0.66 97 123 .. 188 214 .. 182 230 .. 0.69
2 ? 0.8 0.0 0.027 0.027 3 44 .. 686 727 .. 684 745 .. 0.75
3 ! 29.5 0.0 4e-11 4e-11 47 161 .. 792 914 .. 770 915 .. 0.83
Alignments for each domain:
== domain 1 score: -3.8 bits; conditional E-value: 0.66
Cas_Cas4 97 gveikeGvleypkekkreevelteedr 123
+++ k+G+l+y +r elt++++
VIMSS1077693 188 DLTDKKGYLDYSGILNRAVAELTRNRE 214
566778999998888887777766543 PP
== domain 2 score: 0.8 bits; conditional E-value: 0.027
Cas_Cas4 3 tkinyyliCkrklwlish.eitleeesetvelGkllheesyer 44
++++y++ C+ ++ l +++ + e + Gk lh+ +e
VIMSS1077693 686 SDVKYFFECPYQFKLRILyGFNAPLD-EALGYGKSLHDALAEV 727
789***********987746666555.7777799999965554 PP
== domain 3 score: 29.5 bits; conditional E-value: 4e-11
Cas_Cas4 47 kevel.se...sikiDvve.kekeklvvvEvKkskkkeeaa..klQllyYlllLe.kkgveikeGvleypkekkreevelteedreelekaikeiee 135
e++l ++ ++iD+v+ + +++++v++K+ ++ + +a + Ql Y+l + +g ++ +++ + ++++++ +++ + ++ +++ + +
VIMSS1077693 792 IEIALgDGvsvAGRIDLVRrMDTDEVTIVDLKSNDRAQAEAvtETQLHIYALGYKeLTGRPADYVEIYELDNQRQKRRSVDGDFTDDVRRDVLAAAT 888
4455533377799******666778889****99887655549*********99989******999999999999999**********998888888 PP
Cas_Cas4 136 iissekppevkkkkiCkkCayaelCl 161
+++++ p++ kk+C +C y +lC
VIMSS1077693 889 ALRRNQLPPKPGKKACGACDYCNLCS 914
8888899999999************5 PP
Or compare VIMSS1077693 to CDD or PaperBLAST