VIMSS1244842 has 190 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.4e-17 49.7 0.3 3.3e-17 49.3 0.3 1.2 1 VIMSS1244842
Domain annotation for each sequence (and alignments):
>> VIMSS1244842
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 49.3 0.3 3.3e-17 3.3e-17 4 160 .. 14 187 .. 11 189 .. 0.78
Alignments for each domain:
== domain 1 score: 49.3 bits; conditional E-value: 3.3e-17
Cas_Cas4 4 kinyyliCkrklwlish.eitleeesetvelGkllheesyerek.............kevelse........sikiDvvekekeklvvvEvKkskkk 78
i+++ +C+r +++ + i++++ ++++G+ h++ ++ ek ++++l ++ +D+v +++++++vvE+K +
VIMSS1244842 14 LIRQWCFCPRIVYYQELlAIKPNKP-LWIAQGEEFHKKVEQLEKrrsfsryglnnaiRHFNL-SiksqkyklHGIVDWVIETDTNVYVVEYKTNPNP 108
68999**********9989999998.67777******5555444433444445556643333.134567888999*****************98665 PP
Cas_Cas4 79 .eeaaklQllyYlllLekkgveikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelC 160
+ +klQ+ +Y+ll+++ + + ++ + kk e+++t+e+ ++l k+i++i + ++s + p + + ++C+y+++C
VIMSS1244842 109 nSLGHKLQIAAYALLVQEYFAKPC-KTTFLTSDKKSYEIKITDELINKLIKTISDILSTLDSGNKPDSSAS---EQCEYYNFC 187
16678************6655544.35667889999********************999999988877766...578899999 PP
Or compare VIMSS1244842 to CDD or PaperBLAST