VIMSS1248897 has 221 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-19 57.0 0.0 1.6e-19 56.7 0.0 1.1 1 VIMSS1248897
Domain annotation for each sequence (and alignments):
>> VIMSS1248897
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 56.7 0.0 1.6e-19 1.6e-19 3 160 .. 20 197 .. 18 198 .. 0.89
Alignments for each domain:
== domain 1 score: 56.7 bits; conditional E-value: 1.6e-19
Cas_Cas4 3 vkinyyliCkrklwlfsheitmeeeselvelGklihe.............esykrekkevei.se....sikiDvvkkekeklvvvevKkskkie.e 80
++++++++C+r+++l++ +++ e+++ G + h + r+ + +++ s+ +++Dvv+ + + ++++e+K + +
VIMSS1248897 20 SALEHHAYCPRQAALIHLDNVFADNIETMR-GNVAHAhvhepspavptpqGNRIRQVTGLQVwSDrlglYGVCDVVEISSTSAIPIEHKVGPYVPgG 115
6789*************************9.***9997777888776654222223477777766788899********************987515 PP
Cas_Cas4 81 aaklQllyYlllLe.kkgieak.GvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelCl 160
a lQ +++l+L+ + +++ ++++ ++ ++r +v lt++ +++ +a +++++i+++++ pe++ ++ C++C+++ Cl
VIMSS1248897 116 PADLQAGAQALCLRdMLTLDVPyAEVFSHTDRRRHRVDLTDTLATRIITAAERMRDILTTAALPEAVADRRCRRCSLHHDCL 197
67************9***************************************************************9997 PP
Or compare VIMSS1248897 to CDD or PaperBLAST