VIMSS1730045 has 190 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.7e-29 87.3 0.0 7.7e-29 87.1 0.0 1.0 1 VIMSS1730045
Domain annotation for each sequence (and alignments):
>> VIMSS1730045
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 87.1 0.0 7.7e-29 7.7e-29 5 162 .] 10 182 .. 6 182 .. 0.86
Alignments for each domain:
== domain 1 score: 87.1 bits; conditional E-value: 7.7e-29
Cas_Cas4 5 inyyliCkrklwlisheitleeesetvelGkllhe......esyerek....kevelse.........sikiDvvekekeklvvvEvKkskkkeeaa 82
+n + +C+r+++l + ++e +++ ++ G lh + + + ++ ++ ++ iD+ve++++ l++vE+Kk+k ++
VIMSS1730045 10 LNAWEYCHRRFYLEYVLGEMEINEHIIR-GNHLHRnineagT-----SvdgdTRIHRQQwvwsdrlkvKGIIDAVEESDGLLIPVEYKKGKMGKHLN 100
67889****************9966666.******5554441.....133444444422455557877999********************988876 PP
Cas_Cas4 83 .klQllyYlllLe.kkgveikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelCli 162
++Ql++ +l+Le k+g i+ G+++y +++r+ ve+t+++r+ +e+ai ++ + p++ +++k+C C+++ lCl+
VIMSS1730045 101 dHFQLCAAALCLEeKTGKSITYGEIFYYGNRRRQPVEFTQALRNMTEQAIIAAHLACNGPMPRPIANTKKCADCSLERLCLP 182
6*******************************************************************************86 PP
Or compare VIMSS1730045 to CDD or PaperBLAST