VIMSS182047 has 171 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.1e-20 60.6 0.0 1.4e-20 60.3 0.0 1.0 1 VIMSS182047
Domain annotation for each sequence (and alignments):
>> VIMSS182047
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 60.3 0.0 1.4e-20 1.4e-20 7 161 .. 12 169 .. 8 170 .. 0.84
Alignments for each domain:
== domain 1 score: 60.3 bits; conditional E-value: 1.4e-20
Cas_Cas4 7 yyliCkrklwlisheitleeesetvelGkllhe.......esyerek.....kevelse...sikiDvvekekeklvvvEvKkskkkeeaaklQllyY 89
+ C+r lwl +++ + ++++G+ + + k v ++ ++++D++ ++ +vE+K + + ++++k+Ql +
VIMSS182047 12 ELEWCPRYLWLSKRHGVPMTP--NMAAGRGAEAglrrflaK-----AlgaepKPVYIDAgwaHGVVDILV-KRVAASPVEIKTGLP-RREHKWQLYAE 100
6779*********96666666..466788888766654322.....233446*****54799*******9.888999********9.889******** PP
Cas_Cas4 90 lllLekkgveikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelCl 161
++l+++ g + +G++ y + k ++++++++ +++e + ++ e+i+ pp+++k+ +C C y+ +C
VIMSS182047 101 AYLVKAAGCAVYTGYITYGE--KIYRLQISKAELKAAETLLVKAAEVIEG-PPPPPVKTGKCAYCQYRAICT 169
******************98..567788999******************9.799999999***********7 PP
Or compare VIMSS182047 to CDD or PaperBLAST