VIMSS182120 has 190 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-18 53.3 0.0 2.3e-18 53.0 0.0 1.1 1 VIMSS182120
Domain annotation for each sequence (and alignments):
>> VIMSS182120
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 53.0 0.0 2.3e-18 2.3e-18 3 159 .. 8 180 .. 6 182 .. 0.85
Alignments for each domain:
== domain 1 score: 53.0 bits; conditional E-value: 2.3e-18
Cas_Cas4 3 vkinyyliCkrklwlfsheitmeeeselvelGkliheesykr.ek....keveise.......sikiDvvkkekeklvvvevKkskkiee...aaklQ 85
+ i++yl+C+ +++++ + e e++++Gk ++ e+ + k +++e s +++D+v +++ + evK k+ ++ +k+Q
VIMSS182120 8 SLIRQYLYCPAAAYYIMTGAA-EPPTERMRAGKEVQREAVEAvAKalgaEKIEHSPrleggglCGVVDAVLWLRGRPAPLEVKLAKPPRKipvHHKAQ 104
5799************99875.566699*********888774224555556554367778888999*999888999999998877654322278*** PP
Cas_Cas4 86 llyYlllLe.kkgieak.GvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelC 159
++Y++ + + g + ++++y ++ + + ++lt++ e ++++ ++i++i + +p ++ + +C +C y+++C
VIMSS182120 105 AAAYAVAAQhHYGKAVAsAYIYYTETGEVKYIALTRDLVELVKHTAQQIRKIQNGWTPTPAYHPAKCPSCWYRKYC 180
*********999999999*************************************9999999999*********** PP
Or compare VIMSS182120 to CDD or PaperBLAST