VIMSS183208 has 214 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.7e-20 57.6 1.6 1.8e-19 56.6 1.6 1.5 1 VIMSS183208
Domain annotation for each sequence (and alignments):
>> VIMSS183208
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 56.6 1.6 1.8e-19 1.8e-19 4 160 .. 57 210 .. 54 212 .. 0.79
Alignments for each domain:
== domain 1 score: 56.6 bits; conditional E-value: 1.8e-19
Cas_Cas4 4 kinyyliCkrklwlish.eitleeesetvel..Gkllheesyerek.........kevel.sesikiDvvekekeklvvvEvKkskkkeeaaklQlly 88
in y +C+r lw + +++l + ++ v++ G+llhe++++ ++e+ + +++D+v +++++ ++vE+K + + +ea++ Ql+
VIMSS183208 57 VINDYEYCPRLLWTQYKlGLKLFSIDSAVAIvkGRLLHERYERA-VsifdnviaeYKIEIgDLVGVVDIVMRKGNEYIPVEIKTGLASREAHRRQLQI 153
699**********98877776655555554444******54444.2245456766788885559********************************** PP
Cas_Cas4 89 YlllLekkgveikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelC 160
Y+ +L++ + G+l y ++ e+ve + +++ +++ +i+++++++kpp+v+ Ck+C ++ +C
VIMSS183208 154 YIHMLKA-----RYGYLVYR--NRVEKVERD----SKAVEMLYKIKSVLQMDKPPNVN----CKSCPFKYIC 210
*****94.....34777774..567777654....556678889***********985....99**999999 PP
Or compare VIMSS183208 to CDD or PaperBLAST