VIMSS183208 has 214 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.7e-19 54.9 1.7 1e-18 54.1 1.7 1.4 1 VIMSS183208
Domain annotation for each sequence (and alignments):
>> VIMSS183208
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 54.1 1.7 1e-18 1e-18 4 159 .. 57 210 .. 54 212 .. 0.78
Alignments for each domain:
== domain 1 score: 54.1 bits; conditional E-value: 1e-18
Cas_Cas4 4 kinyyliCkrklwlfsh...eitmeeeselvelGkliheesykrek.........kevei.sesikiDvvkkekeklvvvevKkskkieeaaklQlly 88
in y +C+r lw + ++ ++ ++ G+l+he+ ++ ++ei + +++D+v +++++ ++ve+K + + +ea++ Ql+
VIMSS183208 57 VINDYEYCPRLLWTQYKlglKLFSIDSAVAIVKGRLLHERYERA-VsifdnviaeYKIEIgDLVGVVDIVMRKGNEYIPVEIKTGLASREAHRRQLQI 153
699**********98776333333444445556*****944444.22454567667888855699********************************* PP
Cas_Cas4 89 YlllLekkgieakGvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelC 159
Y+ +L+ + G+l y ++ e+ve + +++ e++ +i+++++++kpp+++ Ck+C ++ +C
VIMSS183208 154 YIHMLKAR----YGYLVYR--NRVEKVERD----SKAVEMLYKIKSVLQMDKPPNVN----CKSCPFKYIC 210
*****953....4999985..566667654....455677889***********985....9***999999 PP
Or compare VIMSS183208 to CDD or PaperBLAST