VIMSS188824 has 169 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5e-60 188.5 2.0 5.5e-60 188.3 2.0 1.0 1 VIMSS188824
Domain annotation for each sequence (and alignments):
>> VIMSS188824
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 188.3 2.0 5.5e-60 5.5e-60 2 161 .. 13 168 .. 12 169 .] 0.99
Alignments for each domain:
== domain 1 score: 188.3 bits; conditional E-value: 5.5e-60
Cas_Cas4 2 gtkinyyliCkrklwlisheitleeesetvelGkllheesyerekkevelsesikiDvvekekeklvvvEvKkskkkeeaaklQllyYlllLekkgve 99
g++iny+++C++klw++ h+it+e+ese+v+lGk+lhe++ye+e+kev + + i+iD+++ +++ ++v+EvK +k++e+a+++Q lyYl++L+k+g++
VIMSS188824 13 GIEINYLYVCPTKLWFFTHGITMEQESEWVDLGKFLHEQRYENEEKEVLI-GPIRIDFIS-RGDVIEVHEVKLGKRMERAHEMQALYYLYYLKKHGIK 108
89************************************************.*********.************************************* PP
Cas_Cas4 100 ikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelCl 161
+k ++l+ypk+++++ev+l e +++e+e+ai e+e i ss+kpp++ k+kiC+kCay+elC+
VIMSS188824 109 AK-AILHYPKLNEKREVTL-EGREREVEEAIVEVEVIKSSSKPPKPRKSKICRKCAYKELCW 168
**.****************.88999************************************9 PP
Or compare VIMSS188824 to CDD or PaperBLAST