VIMSS193910 has 919 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.6e-15 42.6 6.6 3.6e-15 42.6 6.6 3.2 3 VIMSS193910
Domain annotation for each sequence (and alignments):
>> VIMSS193910
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.9 0.4 0.36 0.36 93 125 .. 41 73 .. 37 85 .. 0.67
2 ? 1.3 0.1 0.019 0.019 3 45 .. 689 731 .. 687 755 .. 0.70
3 ! 42.6 6.6 3.6e-15 3.6e-15 46 161 .. 789 916 .. 753 917 .. 0.78
Alignments for each domain:
== domain 1 score: -2.9 bits; conditional E-value: 0.36
Cas_Cas4 93 LekkgveikeGvleypkekkreevelteedree 125
L +k ve+k+ ++ ++k +e+el ++r e
VIMSS193910 41 LINKEVEAKKIMITTFTNKAAKELELRINERLE 73
557888888888888888888888886554432 PP
== domain 2 score: 1.3 bits; conditional E-value: 0.019
Cas_Cas4 3 tkinyyliCkrklwlisheitleeesetvelGkllheesyere 45
t+i y +C+ k +l+ + +++ +lG + h+ ++ +
VIMSS193910 689 TDIALYRYCPMKYFLVREKEYSTFDKKVFNLGIITHKAIEHIN 731
78999**********9996666666678888999988333333 PP
== domain 3 score: 42.6 bits; conditional E-value: 3.6e-15
Cas_Cas4 46 k..kevel.se...sikiDvvekekeklvvvEvKkskkk....eeaaklQllyYlllLe.kkgveikeGvleypkekkree.vel.teedreelekai 130
e+++ ++ ++iD++ ++++++ +++ K +k + + + Ql Y llL+ k + eik +l+y++e + ++ + + +e+++e le++
VIMSS193910 789 VeaSEFRVeDNyilYGQIDLILEDENEIKIIDFKTGKYNefefSSNYRQQLSLYKLLLQkKYDKEIK-TYLYYLEEDEPKKeILIdDEDLKEDLENIN 885
1235555533377789******9*************97755557788************88999999.******9988655366625567889***** PP
Cas_Cas4 131 keieeiissekppevkkkkiCkkCayaelCl 161
k +++i++++ p+ + +++iC C+++++C+
VIMSS193910 886 KTVQDILDKKFPKIPYNQNICGICEFKNYCW 916
******************************9 PP
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