VIMSS2105431 has 189 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-19 56.9 0.0 1.7e-19 56.7 0.0 1.0 1 VIMSS2105431
Domain annotation for each sequence (and alignments):
>> VIMSS2105431
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 56.7 0.0 1.7e-19 1.7e-19 3 160 .. 8 179 .. 6 181 .. 0.86
Alignments for each domain:
== domain 1 score: 56.7 bits; conditional E-value: 1.7e-19
Cas_Cas4 3 tkinyyliCkrklwlisheitleeesetvelGkllheesyer.ek....kevelse.......sikiDvvekekeklvvvEvKkskkk...eeaakl 84
+ i++yl+C+ +++i+ ++ e+++ Gk ++ e+ e k ++ve s +++D+v +++ ++EvK ++ ++k+
VIMSS2105431 8 SLIRQYLYCPAAAYYIATGLAEP-PTERMRRGKEIQREAIEAiAKalqaEKVEHSPrlegwgiCGVVDAVLWIRGRPAPLEVKYTTPPpktPLPHKA 103
5799**************99755.5599999******7777742234445555543788899899******9999********998773324478** PP
Cas_Cas4 85 QllyYlllLe.kkgveikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelC 160
Q +Y+l + + +++++++y + + ++v+lt+++++ + ++++++ +i++ +p+++ +++C+ C y+++C
VIMSS2105431 104 QAAAYALAAQaTYRKAATHAYIYYAEAGEVRTVQLTQDLTHLVLQTAAQVAKILKG-WTPHPQPTPKCQGCWYKKYC 179
**********777777889***********************************99.8******************* PP
Or compare VIMSS2105431 to CDD or PaperBLAST