VIMSS248522 has 199 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.2e-20 58.4 7.0 6.4e-20 58.1 7.0 1.1 1 VIMSS248522
Domain annotation for each sequence (and alignments):
>> VIMSS248522
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 58.1 7.0 6.4e-20 6.4e-20 2 161 .. 13 199 .] 12 199 .] 0.80
Alignments for each domain:
== domain 1 score: 58.1 bits; conditional E-value: 6.4e-20
Cas_Cas4 2 gtkinyyliCkrklwlish.ei.tleeesetvelGkllhe......esyerek.......kevel.se....sikiDvve.kekeklvvvEvKkskkk 78
++++ yl+C r ++++ i + ee+ +v G+ +he + y r+k +v + s+ ++ +D v e+++ ++E+K + k
VIMSS248522 13 ISDVLEYLFCSRFIYYMYClDIpQHEEKRFKVIKGREVHEtrkltnRDYVRKKlncirkeSDVFIaSKknhiKGIVDEVLfLEDGTAAPLEYKFAEYK 110
678999**********998655356666778888******8777663444433555554566666655888877788777799999999****87655 PP
Cas_Cas4 79 ...eeaaklQllyYlllLe.kkgveikeGvleypkekkree.velteedreelekaikeieeiissekppevkkkk.iCkkCayaelCl 161
+ k+Ql ++ll++ + ++e+++++l + ++ ++ +e+t+ d +++ek+i+ei +i+++ +p++++++ +C C y+++C+
VIMSS248522 111 dkvFKTYKFQLVLQALLIReNYNIEVNRAYLCFTRSNSLVKeMEITSSDFKKAEKIIEEILDIVQKGLYPKTSRSSrKCVDCCYRNICV 199
22255669***********9****************998765*************************8888776554***********6 PP
Or compare VIMSS248522 to CDD or PaperBLAST