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Align VIMSS3239994 to PF01930 (Cas_Cas4)

VIMSS3239994 has 207 amino acids

Query:       Cas_Cas4  [M=162]
Accession:   PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence     Description
    ------- ------ -----    ------- ------ -----   ---- --  --------     -----------
    3.1e-13   36.3  12.3    3.9e-13   36.0  12.3    1.1  1  VIMSS3239994  


Domain annotation for each sequence (and alignments):
>> VIMSS3239994  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   36.0  12.3   3.9e-13   3.9e-13       9     161 ..      29     203 ..      26     204 .. 0.76

  Alignments for each domain:
  == domain 1  score: 36.0 bits;  conditional E-value: 3.9e-13
      Cas_Cas4   9 liCkrklwlish.eitleeesetvelGkllhe..esyerek....kevel.se......sikiDvvekekeklvvvEvKkskkk....eeaaklQll 87 
                    iC rk +l  + e++   ++ +++lG++ he  e+y +ek    +eve+ +e      s++iD+v     +  ++E+K  +      +e + +Q+ 
  VIMSS3239994  29 GICYRKSYLARNiEFERGINEIYLDLGEQYHEriEQYFKEKlncqTEVEIkDEiegmkiSGRIDIVC----GNDLLEIKTISYNyfqvKEYHLYQVA 121
                   59*******98778888888889999******774444455678899*996669999999*******....445566665544334548889***** PP

      Cas_Cas4  88 yYlllLekkgveikeGvleypkekkree..velteedr....eelekaikeieeiissekppev..kkkkiCkkCayaelCl 161
                    Y  +L+k++ +i++ ++ y++ + re    +++e+      +++ + ik+ +e+++++ +++v  +++ iCk+C++++ C+
  VIMSS3239994 122 LYYHILKKQNYQINNVYIIYLNRNTREVkqFKIDEKVLetyyQKVIEWIKKFKEYLKETDYKKVpgVNNYICKSCEFKQKCI 203
                   ********************98776654337777764411115667777888888888866655236888***********7 PP



Or compare VIMSS3239994 to CDD or PaperBLAST