VIMSS3375468 has 172 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.2e-57 179.3 11.7 3.6e-57 179.2 11.7 1.0 1 VIMSS3375468
Domain annotation for each sequence (and alignments):
>> VIMSS3375468
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 179.2 11.7 3.6e-57 3.6e-57 1 161 [. 11 168 .. 11 169 .. 0.98
Alignments for each domain:
== domain 1 score: 179.2 bits; conditional E-value: 3.6e-57
Cas_Cas4 1 tgtkinyyliCkrklwlisheitleeesetvelGkllheesyer.ekkevelsesikiDvvekekeklvvvEvKkskkkeeaaklQllyYlllLe.k 95
+g+kinyy++Ckrklwl+s++it+e++s++v Gk++he+sy+r ++ke+ +++ +k+D+++ + +v EvK s+k++ea+++Ql yYl++L+ +
VIMSS3375468 11 QGVKINYYYVCKRKLWLFSKGITMEQNSSRVLSGKIVHEDSYKRmKNKEILIDDILKLDIIK----DEYVKEVKISSKMKEADEMQLYYYLYYLKnS 103
599*****************************************666***************....99***************************** PP
Cas_Cas4 96 kgveikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelCl 161
+g+e k G+++y+kekk+ee+ ltee+++ +e+++ +i+ei + +pp+ +kk++C+kCay+e+C+
VIMSS3375468 104 MGIEKK-GTINYVKEKKQEELILTEEKERIIENTLININEINMQLSPPKIEKKHYCTKCAYYEFCF 168
******.**********************************************************8 PP
Or compare VIMSS3375468 to CDD or PaperBLAST