VIMSS3494896 has 178 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.7e-21 61.4 1.7 1e-20 60.6 1.7 1.4 1 VIMSS3494896
Domain annotation for each sequence (and alignments):
>> VIMSS3494896
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 60.6 1.7 1e-20 1e-20 4 159 .. 22 175 .. 19 177 .. 0.81
Alignments for each domain:
== domain 1 score: 60.6 bits; conditional E-value: 1e-20
Cas_Cas4 4 kinyyliCkrklwlfsh...eitmeeeselvelGkliheesykrek.........keveise.sikiDvvkkekeklvvvevKkskkieeaaklQll 87
in y +C+r lw ++ ++ +++ ++ Gkl+he+ ++ +vei++ +++Dvv k+++ +ve+K + + +ea+k Ql+
VIMSS3494896 22 VINDYEYCPRLLWVQHRlglKLFTKDSAVAIVKGKLLHERYERA-VavydnviveYKVEIDNlVGVVDVVIKRGGVYLPVEIKTGVASREAHKKQLQ 117
699************999555666777777778*****944433.224544566677888556889999999************************* PP
Cas_Cas4 88 yYlllLekkgieak.GvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelC 159
Y+ lL+ k G+l y k e+ve + +++ ++++ei+++++ +kpp+++ C+kC ++ +C
VIMSS3494896 118 IYIHLLKA-----KyGYLVYRD--KVEKVERD----DSALQVLSEIKKVLTADKPPSVE----CRKCPFKPIC 175
******84.....339999965..66777664....4567899*************997....*********9 PP
Or compare VIMSS3494896 to CDD or PaperBLAST