VIMSS3494896 has 178 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.2e-22 64.4 2.1 1.5e-21 63.4 2.1 1.5 1 VIMSS3494896
Domain annotation for each sequence (and alignments):
>> VIMSS3494896
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 63.4 2.1 1.5e-21 1.5e-21 4 161 .. 22 176 .. 19 177 .. 0.79
Alignments for each domain:
== domain 1 score: 63.4 bits; conditional E-value: 1.5e-21
Cas_Cas4 4 kinyyliCkrklwlish.eitleeesetvel..Gkllheesyerek.........kevelse.sikiDvvekekeklvvvEvKkskkkeeaaklQll 87
in y +C+r lw ++ +++l +++ v++ Gkllhe++++ +ve+++ +++Dvv k+++ +vE+K + + +ea+k Ql+
VIMSS3494896 22 VINDYEYCPRLLWVQHRlGLKLFTKDSAVAIvkGKLLHERYERA-VavydnviveYKVEIDNlVGVVDVVIKRGGVYLPVEIKTGVASREAHKKQLQ 117
699*************99666555555544444******54444.22454456667777744689999999999*********************** PP
Cas_Cas4 88 yYlllLekkgveikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelCl 161
Y+ lL++ k G+l y k e+ve + +++ ++++ei+++++ +kpp+v+ C+kC ++++C
VIMSS3494896 118 IYIHLLKA-----KYGYLVYR--DKVEKVERD----DSALQVLSEIKKVLTADKPPSVE----CRKCPFKPICR 176
******84.....45788775..466777664....4677899*************997....**********5 PP
Or compare VIMSS3494896 to CDD or PaperBLAST