VIMSS380343 has 559 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.9e-26 77.7 0.0 8.2e-26 77.2 0.0 1.2 1 VIMSS380343
Domain annotation for each sequence (and alignments):
>> VIMSS380343
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 77.2 0.0 8.2e-26 8.2e-26 4 162 .] 15 198 .. 12 198 .. 0.90
Alignments for each domain:
== domain 1 score: 77.2 bits; conditional E-value: 8.2e-26
Cas_Cas4 4 kinyyliCkrklwlisheitleeesetvelGkllhe...........esyerek.....kevel.se....sikiDvvekekeklvvvEvKkskkk.. 78
++n +++C+r ++l+ ++ + ++++ tv+ G + h e ++e+ ++v+l se + kiD+ve e++ + +v++K++k+
VIMSS380343 15 MLNEHVYCPRLAYLMWVQGEFSHNEFTVD-GVIRHRrvdagggvlpsE--TQEDsrihaRSVSLsSErlgiTAKIDLVEGEGAYVSPVDYKRGKRPhv 109
7899*************************.*****9*******99762..332224667*****6669*999*******9999999*********999 PP
Cas_Cas4 79 ....eeaaklQllyYlllLekkgveikeGvleypkekkreevelteedreelekaikeieeiisse.kppevkkkkiCkkCayaelCli 162
e+ ++Ql+++ llL+++g + G+l+++ +++r+ v +++e+ ++ ai+e+ + s pp+ +++++C +C++ +Cl+
VIMSS380343 110 aggaYEPERVQLCAQGLLLREHGFASDGGALYFVASRERVPVAFDDELIGRTLAAIDEMGRTALSGtMPPPLEDSPKCPRCSLVGICLP 198
99977788***************************************************87766553888899999***********85 PP
Or compare VIMSS380343 to CDD or PaperBLAST