VIMSS563203 has 170 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.8e-58 181.2 0.6 9.9e-58 181.0 0.6 1.0 1 VIMSS563203
Domain annotation for each sequence (and alignments):
>> VIMSS563203
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 181.0 0.6 9.9e-58 9.9e-58 2 161 .. 6 165 .. 5 166 .. 0.97
Alignments for each domain:
== domain 1 score: 181.0 bits; conditional E-value: 9.9e-58
Cas_Cas4 2 gtkinyyliCkrklwlisheitleeesetvelGkllheesyerek...kevelsesikiDvvekekeklvvvEvKkskkkeeaaklQllyYlllLekk 96
gt+ ny+ +C+rklwl+s +it+e++s+ v++Gkl+he++y+++ +e+el + ikiD+ + ++ vv+EvKks+k+++a++lQllyYl++Le++
VIMSS563203 6 GTHFNYHQVCRRKLWLFSAGITMEHTSDLVYEGKLIHETTYQQRPeryQELEL-DGIKIDFYD--AKNRVVHEVKKSNKISPAHRLQLLYYLYVLERN 100
89***************************************99444589****.*********..9999***************************** PP
Cas_Cas4 97 gveikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelCl 161
gv +G+leyp+++k+eev l++ dre+++++ +ei +iis+e +p+v ++ iCk+C+y+e+C+
VIMSS563203 101 GVLGATGILEYPTLRKKEEVILSDIDRERIREIEQEILQIISHEDCPPVIDSGICKNCSYYEFCF 165
****************************************************************9 PP
Or compare VIMSS563203 to CDD or PaperBLAST