VIMSS8948 has 170 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-59 186.6 7.6 2.1e-59 186.4 7.6 1.0 1 VIMSS8948
Domain annotation for each sequence (and alignments):
>> VIMSS8948
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 186.4 7.6 2.1e-59 2.1e-59 2 162 .] 13 170 .] 12 170 .] 0.99
Alignments for each domain:
== domain 1 score: 186.4 bits; conditional E-value: 2.1e-59
Cas_Cas4 2 gtkinyyliCkrklwlisheitleeesetvelGkllheesyerekkevelsesikiDvvekekeklvvvEvKkskkkeeaaklQllyYlllLekkgveik 101
g++iny+++Ck+klw++ ++it+e+es+ v+lGk+lhe+sy e+kev++ +sikiD+++ +++ ++++EvK++k++e+a+ +Q+lyY+++L++ g++ k
VIMSS8948 13 GIEINYLYVCKTKLWYFVRGITMEQESDFVDLGKFLHEKSYFGEEKEVQI-GSIKIDFIK-KRDVIEIHEVKRGKQMEKAHIMQVLYYIYYLNSLGIKSK 110
89************************************************.*********.9999*********************************** PP
Cas_Cas4 102 eGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelCli 162
++l+ypk+k+ +e+el+e+++ee+++aikeie i s ++ppe+ ++kiCk+Cay+elC+i
VIMSS8948 111 -AILHYPKLKEIKEIELKENNKEEIKRAIKEIEYIKSLKEPPEPIYQKICKNCAYYELCFI 170
.**********************************************************96 PP
Or compare VIMSS8948 to CDD or PaperBLAST