XP_012049843.1 has 1419 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-10 27.6 1.3 6.4e-10 25.6 0.0 2.4 2 XP_012049843.1
Domain annotation for each sequence (and alignments):
>> XP_012049843.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 25.6 0.0 6.4e-10 6.4e-10 57 144 .. 551 643 .. 532 649 .. 0.86
2 ? -0.9 0.8 0.086 0.086 130 161 .. 671 703 .. 653 704 .. 0.68
Alignments for each domain:
== domain 1 score: 25.6 bits; conditional E-value: 6.4e-10
Cas_Cas4 57 iDvve..kekeklvvvEvKkskkk.eeaaklQllyYlllLe.kkgveikeGvleypkekkreevelteedreelekaikeieeiisse.kppe 144
D ++ + +e++ ++E+K +++ a+++Q + Y ll+e + gv + G l+y + +ve ++++ ++l a +e +is++ k+p+
XP_012049843.1 551 RDPLHgsQAEEHVAPFEIKTGRSVgVMAHRAQTMLYTLLMEdRYGVPVPAGLLYYSALDTILRVEAKQNEIRALIMARNELAMYISKQrKVPK 643
566666567899999********957788*******************************************999999999999888756665 PP
== domain 2 score: -0.9 bits; conditional E-value: 0.086
Cas_Cas4 130 ikeieeiisse.kppevkkkkiCkkCayaelCl 161
++ e ++++ pp + + Ck C e C+
XP_012049843.1 671 EEKLETEVEEAfLPPTIDNMRDCKMCYAVESCM 703
3334433444437899999999****9999996 PP
Or compare XP_012049843.1 to CDD or PaperBLAST