biolip::4ic1D has 206 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.6e-12 32.5 0.0 6.4e-12 32.1 0.0 1.3 1 biolip::4ic1D
Domain annotation for each sequence (and alignments):
>> biolip::4ic1D
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 32.1 0.0 6.4e-12 6.4e-12 4 160 .. 29 201 .. 26 203 .. 0.75
Alignments for each domain:
== domain 1 score: 32.1 bits; conditional E-value: 6.4e-12
Cas_Cas4 4 kinyyliCkrklwlish..eitleeese.tvelGkllhe..........esyerek...kevel.se....sikiDvve.kekeklvvvEvKkskk 77
+ ++ C+r++ + s e+ +++ ++ ++ lG +lh +++++ +e+++ + +++ D++ ++++k +v+E+K s++
biolip::4ic1D 29 YVTDLVRCPRRVRYESEykELAISQVYApSAILGDILHLglesvlkgnfNAETE-VetlREINVgGKvykiKGRADAIIrNDNGKSIVIEIKTSRS 123
577788899999998875566666654424455999998888888876533333.245899999444999999***9875888999*********9 PP
Cas_Cas4 78 k....eeaaklQllyYlllLekkgveikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelC 160
+k+Ql+ Yl+l+ +++G+l y++ + e e++e + e++ +++ +e+ i ++ p+ + Ck C ++ +C
biolip::4ic1D 124 DkglpLIHHKMQLQIYLWLFS-----AEKGILVYITPDRIAEYEINEPLDEAT--IVRLAEDTIMLQNSPRF--NWECKYCIFSVIC 201
956655789**********87.....45699999***********99988875..45555666666555554..5669999999888 PP
Or compare biolip::4ic1D to CDD or PaperBLAST