biolip::4ic1D has 206 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-11 30.5 0.0 2.9e-11 29.9 0.0 1.4 1 biolip::4ic1D
Domain annotation for each sequence (and alignments):
>> biolip::4ic1D
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 29.9 0.0 2.9e-11 2.9e-11 5 159 .. 30 201 .. 26 203 .. 0.70
Alignments for each domain:
== domain 1 score: 29.9 bits; conditional E-value: 2.9e-11
Cas_Cas4 5 inyyliCkrklwlfsh..eitmeeese.lvelGklihe..........esykrek...keveise.....sikiDvvk.kekeklvvvevKkskki 78
+ ++ C+r++ + s+ e+ +++ ++ + lG ++h +++++ +e+++ + +++ D++ ++++k +v+e+K s++
biolip::4ic1D 30 VTDLVRCPRRVRYESEykELAISQVYApSAILGDILHLglesvlkgnfNAETE-VetlREINVGGkvykiKGRADAIIrNDNGKSIVIEIKTSRSD 124
56666777777777664344444443313455777777666666655422222.1346999994469999999**8764788899*********99 PP
Cas_Cas4 79 ....eeaaklQllyYlllLekkgieakGvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelC 159
+k+Ql+ Yl+l++ kG+l y++ + e e++e e++ +++ +e+ i+ ++ p+ + Ck C ++ +C
biolip::4ic1D 125 kglpLIHHKMQLQIYLWLFSA----EKGILVYITPDRIAEYEINEPLDEAT--IVRLAEDTIMLQNSPRF--NWECKYCIFSVIC 201
44444689**********984....36899*************99887764..55556666666666655..5679999999998 PP
Or compare biolip::4ic1D to CDD or PaperBLAST