biolip::4r5qA has 215 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.1e-19 56.4 1.3 6.5e-19 54.8 1.3 1.7 1 biolip::4r5qA
Domain annotation for each sequence (and alignments):
>> biolip::4r5qA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 54.8 1.3 6.5e-19 6.5e-19 4 161 .. 60 213 .. 57 214 .. 0.80
Alignments for each domain:
== domain 1 score: 54.8 bits; conditional E-value: 6.5e-19
Cas_Cas4 4 kinyyliCkrklwlish.eitleeesetvel..Gkllhe......esyerek...kevel.sesikiDvvekekeklvvvEvKkskkkeeaaklQl 86
in + +C+r lw ++ +++l +e++ v++ G++lhe ++ye+ +ve+ + +++D+v k++++ ++vE+K + + +ea+k Ql
biolip::4r5qA 60 IINDFEYCPRLLWVQHKlGLKLLSEKSVVSIirGRILHEryerllSQYEN-VvaeYKVEIgDLVGVVDLVIKRGGEYIPVEIKTGFS-KEAHKTQL 153
6999************99887777766666555******66666544555.1455889996669*********************99.89****** PP
Cas_Cas4 87 lyYlllLekkgveikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelCl 161
+ Y+ +L++ + G+l y + +ev +++++ +++k+i+ei+s + p++ +C++C ++++C
biolip::4r5qA 154 QIYISMLKA-----RFGYLVYR---NHVEVVH---RNDAALDVLKKIREILSAREAPPA----KCNSCIFKPICK 213
*******84.....34777774...4444443...56778899*********9888876....5******99995 PP
Or compare biolip::4r5qA to CDD or PaperBLAST