biolip::4r5qA has 215 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-18 53.3 0.7 3.9e-18 52.2 0.7 1.5 1 biolip::4r5qA
Domain annotation for each sequence (and alignments):
>> biolip::4r5qA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 52.2 0.7 3.9e-18 3.9e-18 4 160 .. 60 213 .. 57 214 .. 0.79
Alignments for each domain:
== domain 1 score: 52.2 bits; conditional E-value: 3.9e-18
Cas_Cas4 4 kinyyliCkrklwlfsh.eitm..eeeselvelGklihe......esykr..ekkevei.sesikiDvvkkekeklvvvevKkskkieeaaklQll 87
in + +C+r lw ++ ++++ e++ ++ G+++he ++y++ + +vei + +++D+v k++++ ++ve+K + + +ea+k Ql+
biolip::4r5qA 60 IINDFEYCPRLLWVQHKlGLKLlsEKSVVSIIRGRILHEryerllSQYENvvAEYKVEIgDLVGVVDLVIKRGGEYIPVEIKTGFS-KEAHKTQLQ 154
6999**********9998666511555556667******7776665555544348999966699********************99.99******* PP
Cas_Cas4 88 yYlllLekkgieak.GvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelCl 160
Y+ +L+ + G+l y ++ +ev +++++ +++k+i+ei+s + p++ +C++C ++ +C
biolip::4r5qA 155 IYISMLKA-----RfGYLVY---RNHVEVVH---RNDAALDVLKKIREILSAREAPPA----KCNSCIFKPICK 213
*****984.....4488887...44555554...56678899**********888886....5*****999995 PP
Or compare biolip::4r5qA to CDD or PaperBLAST