biolip::6ppuA has 601 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-09 24.1 0.0 2.9e-09 23.4 0.0 1.3 1 biolip::6ppuA
Domain annotation for each sequence (and alignments):
>> biolip::6ppuA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.4 0.0 2.9e-09 2.9e-09 53 160 .. 483 598 .. 444 600 .. 0.79
Alignments for each domain:
== domain 1 score: 23.4 bits; conditional E-value: 2.9e-09
Cas_Cas4 53 e....sikiDvve.kekeklvvvEvKkskkkeeaaklQllyYl..llLe.kkgveikeGvleypke.kkreevelteedreelekaikeieeiiss 139
++++D++e +e ++lvvv++K +k+ +++ +Q ++l + L + g+e G+l y+ + +re+ lt+++r e +++ e+ + ++
biolip::6ppuA 483 PgvrvRGRLDRLErDEAGRLVVVDLKTGKSPVTKDDAQNHAQLamYQLAvAAGLEPGGGKLVYLGKaTEREQDPLTPDKRAEWLETVGEAAAATAG 578
14555899*****7888999*********99777777766664225677789*********9986516788899*****************99999 PP
Cas_Cas4 140 ekppevkkkkiCkkCayaelC 160
+ ++ ++ C +C ++ C
biolip::6ppuA 579 PRF-VARVNNGCANCPVRSSC 598
655.4455678****999999 PP
Or compare biolip::6ppuA to CDD or PaperBLAST