biolip::6ppuA has 601 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.2e-08 20.0 0.0 5e-08 19.4 0.0 1.3 1 biolip::6ppuA
Domain annotation for each sequence (and alignments):
>> biolip::6ppuA
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 19.4 0.0 5e-08 5e-08 54 159 .. 488 598 .. 459 600 .. 0.80
Alignments for each domain:
== domain 1 score: 19.4 bits; conditional E-value: 5e-08
Cas_Cas4 54 sikiDvvk.kekeklvvvevKkskkieeaaklQllyYl..llLe.kkgieak.Gvleypke.kkreevelteedreeleeaikeieeiissekppe 143
++++D ++ +e ++lvvv++K +k+ +++ +Q ++l + L g+e G+l y+ + +re+ lt ++r e e++ e+ + ++ +
biolip::6ppuA 488 RGRLDRLErDEAGRLVVVDLKTGKSPVTKDDAQNHAQLamYQLAvAAGLEPGgGKLVYLGKaTEREQDPLTPDKRAEWLETVGEAAAATAGPRFV- 582
7899***97788999*********99877777766654226677789***999****986516778899***************99999995554. PP
Cas_Cas4 144 pkkkkiCkkCayaelC 159
++ ++ C +C ++ C
biolip::6ppuA 583 ARVNNGCANCPVRSSC 598
455678****999999 PP
Or compare biolip::6ppuA to CDD or PaperBLAST