biolip::8d3lI has 218 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.8e-30 92.4 1.6 2.5e-30 91.9 1.6 1.2 1 biolip::8d3lI
Domain annotation for each sequence (and alignments):
>> biolip::8d3lI
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 91.9 1.6 2.5e-30 2.5e-30 3 160 .. 12 199 .. 10 200 .. 0.85
Alignments for each domain:
== domain 1 score: 91.9 bits; conditional E-value: 2.5e-30
Cas_Cas4 3 vkinyyliCkrklwlfsheitmeeeselvelGklihe......esykrek.....kevei.se....sikiDvvk..kekeklvv........... 69
+ ++++ +Ckr+++l+++e ++ee+ ++e G+ +h+ ++kr + + i s+ s+ +Dvv+ ++ e +++
biolip::8d3lI 12 SGLQHFQFCKRQWALIHIEQQWEENVRTIE-GQHLHKkadqpfMKEKR-GskltvRAMPIqSKnlqiSGICDVVEfvQDSEGIELsgvsgsykafp 105
5689**************************.******88877633333.03466655555333455577889999755555666689999999999 PP
Cas_Cas4 70 vevKkskkieeaa.klQllyYlllLe.kkgieak.GvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelCl 160
ve+K++k+++ + +Ql +++++Le + +++ G+l+y + k+r+ev +t++ r+++ ++ ke++++ ++ ++p++k+ ++C++C+++ +Cl
biolip::8d3lI 106 VEYKRGKPKKGDEdIVQLVAQAMCLEeMLVCRIDkGYLFYNEIKHRVEVPITDALRDKVVQMAKEMHHYYENRHTPKVKTGPFCNNCSLQSICL 199
*******99877769***********777778889**********************************************************8 PP
Or compare biolip::8d3lI to CDD or PaperBLAST