biolip::8d3qJ has 190 amino acids
Query: Cas_Cas4 [M=161]
Accession: PF01930.21
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-24 73.1 3.9 3.7e-24 71.8 3.9 1.6 1 biolip::8d3qJ
Domain annotation for each sequence (and alignments):
>> biolip::8d3qJ
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 71.8 3.9 3.7e-24 3.7e-24 3 160 .. 11 171 .. 9 172 .. 0.85
Alignments for each domain:
== domain 1 score: 71.8 bits; conditional E-value: 3.7e-24
Cas_Cas4 3 vkinyyliCkrklwlfsheitmeeeselvel.GkliheesykrekkeveisesikiDvvkkekeklvvvevKkskkieeaa.klQllyYlllLe.k 95
+ ++++ +Ckr+++l+++e +++ + ++ + k ++ + + + v+ se i++ v+ k+ +ve+K++k+++ + +Ql +++++Le +
biolip::8d3qJ 11 SGLQHFQFCKRQWALIHIEQQWKLTVRAMPIqSKNLQISGICDVVEFVQDSEGIELSGVS-GSYKAFPVEYKRGKPKKGDEdIVQLVAQAMCLEeM 105
5689******************99988777312333333333332444447788888888.8889999*******99877769***********77 PP
Cas_Cas4 96 kgieak.GvleypkekkreevelteedreeleeaikeieeiissekppepkkkkiCkkCayaelCl 160
+++ G+l+y + k+r+ev +t++ r+++ ++ ke++++ ++ ++p++k+ ++C++C+++ +Cl
biolip::8d3qJ 106 LVCRIDkGYLFYNEIKHRVEVPITDALRDKVVQMAKEMHHYYENRHTPKVKTGPFCNNCSLQSICL 171
7778889**********************************************************8 PP
Or compare biolip::8d3qJ to CDD or PaperBLAST