biolip::8d3qJ has 190 amino acids
Query: Cas_Cas4 [M=162]
Accession: PF01930.20
Description: Domain of unknown function DUF83
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-29 89.6 3.6 3.7e-29 88.1 3.6 1.7 1 biolip::8d3qJ
Domain annotation for each sequence (and alignments):
>> biolip::8d3qJ
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 88.1 3.6 3.7e-29 3.7e-29 3 162 .] 11 172 .. 9 172 .. 0.85
Alignments for each domain:
== domain 1 score: 88.1 bits; conditional E-value: 3.7e-29
Cas_Cas4 3 tkinyyliCkrklwlisheitleeesetvel.Gkllheesyerekkevel.sesikiDvvekekeklvvvEvKkskkkeeaa.klQllyYlllLe. 94
++++++ +Ckr+++li++e +++ + + + k l+ + + e+ se i++ v+ k +vE+K++k+k+ + +Ql +++++Le
biolip::8d3qJ 11 SGLQHFQFCKRQWALIHIEQQWKLTVRAMPIqSKNLQISGIC-DVVEFVQdSEGIELSGVS-GSYKAFPVEYKRGKPKKGDEdIVQLVAQAMCLEe 104
789********************9987777312333322222.223333336677777777.7777888********9988879***********9 PP
Cas_Cas4 95 kkgveikeGvleypkekkreevelteedreelekaikeieeiissekppevkkkkiCkkCayaelCli 162
+ +i++G+l+y + k+r+ev +t+++r+++ +++ke++++ ++ ++p+vk+ ++C++C+++ +Cl+
biolip::8d3qJ 105 MLVCRIDKGYLFYNEIKHRVEVPITDALRDKVVQMAKEMHHYYENRHTPKVKTGPFCNNCSLQSICLP 172
9999**************************************************************86 PP
Or compare biolip::8d3qJ to CDD or PaperBLAST