VIMSS134307 has 325 amino acids
Query: CofD [M=290]
Accession: PF01933.22
Description: 2-phospho-L-lactate transferase CofD
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.6e-102 326.8 0.0 6.4e-102 326.6 0.0 1.0 1 VIMSS134307
Domain annotation for each sequence (and alignments):
>> VIMSS134307
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 326.6 0.0 6.4e-102 6.4e-102 1 290 [] 6 299 .. 6 299 .. 0.95
Alignments for each domain:
== domain 1 score: 326.6 bits; conditional E-value: 6.4e-102
CofD 1 ivvigGGtGlsklLrgLkkytaeitaivtvaDdggssGrlreelg.llppgDirnvlvaLadeeklleeLfqyrfkg.dgdlaghslgnllLaalaei 96
i+vigGGtG++++L++L++ + ei aivtvaDdggssG+lr++++ l+ppgD+rnvlva++d++k++e++fqyrf++ g +agh lgnl++a+l+e+
VIMSS134307 6 ITVIGGGTGIPVILKSLREKDVEIAAIVTVADDGGSSGELRKNMQqLTPPGDLRNVLVAMSDMPKFYEKVFQYRFSEdAGAFAGHPLGNLIIAGLSEM 103
89****************************************996589****************************956789**************** PP
CofD 97 tgdleeaiealskvlavrgkvlPatdepvelhaeledgtvvegeskiseakkaeakikrvflepedak....alpevleaieeAdlivlgPGslytSi 190
+g++ +a++ lsk+++++gk++P++d+p++lha+++dgt+v ges+i ++++ i++v+++++ + a+++v++ i e+d+ivlgPGsl+tSi
VIMSS134307 104 QGSTYNAMQLLSKFFHTTGKIYPSSDHPLTLHAVFQDGTEVAGESHIVDHRG---IIDNVYVTNALNDdtplASRRVVQTILESDMIVLGPGSLFTSI 198
***********************************************99999...6666666655443233399************************ PP
CofD 191 lPnLlvpgiaealreskakvvyvsnimtqpGetdgytvsdhvkailehlgkgyidavlvnteeipeellekyae.egaepvevDaekleklgveviea 287
lPn+++++i++al e+ka++ yv+nimtq+Get+++t s+hv+++++hlg+ +id+vlvn e++p+e++++++ e+ +ve+D+ l k+ +vi++
VIMSS134307 199 LPNIVIKEIGRALLETKAEIAYVCNIMTQRGETEHFTDSNHVEVLHRHLGRPFIDTVLVNIEKVPQEYMNSNRFdEYLVQVEHDFVGLCKQVSRVISS 296
**********************************************************************9998899*******99999999999999 PP
CofD 288 dll 290
++l
VIMSS134307 297 NFL 299
985 PP
Or compare VIMSS134307 to CDD or PaperBLAST