VIMSS33195 has 342 amino acids
Query: CofD [M=290]
Accession: PF01933.22
Description: 2-phospho-L-lactate transferase CofD
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.7e-78 247.8 0.0 8e-78 247.5 0.0 1.0 1 VIMSS33195
Domain annotation for each sequence (and alignments):
>> VIMSS33195
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 247.5 0.0 8e-78 8e-78 1 273 [. 5 284 .. 5 297 .. 0.94
Alignments for each domain:
== domain 1 score: 247.5 bits; conditional E-value: 8e-78
CofD 1 ivvigGGtGlsklLrgLkkytaeitaivtvaDdggssGrlreelgllppgDirnvlvaLadeek...lleeLfqyrfkgdgdlaghslgnllLaalaei 96
iv++gGG+Gl L++ +++t +ta+vtvaDdggssGrlr+el+++ppgD+r l+aLa +++ l+ ++q+rf g g lagh +gnl+La+l+e+
VIMSS33195 5 IVALGGGHGLYATLSAARRLTPYVTAVVTVADDGGSSGRLRSELDVVPPGDLRMALAALASDSPhgrLWATILQHRFGGSGALAGHPIGNLMLAGLSEV 103
9**********************************************************66666688******************************** PP
CofD 97 tgdleeaiealskvlavrgkvlPatdepvelhaeledgtv.......vegeskiseakkaeakikrvflepedakalpevleaieeAdlivlgPGslyt 188
d +a ++l ++l v+g+vlP++ ++++a ++ + ++g+++i+++ + k++rv l p+d+ a++++++ai+ Adl+vlgPGs +t
VIMSS33195 104 LADPVAALDELGRILGVKGRVLPMCPVALQIEADVSGLEAdprmfrlIRGQVAIATTPG---KVRRVRLLPTDPPATRQAVDAIMAADLVVLGPGSWFT 199
**********************************965555999999999*****88888...************************************* PP
CofD 189 SilPnLlvpgiaealreskakvvyvsnimtqpGetdgytvsdhvkailehlgkgyidavlvnteeipeellekyaeegaepvevD 273
S++P+ lvpg+a alr+++a++ +v n++ +pGet g++v++h++++ +h+ + ++++ e++p+e +++ +++a+ ++ +
VIMSS33195 200 SVIPHVLVPGLAAALRATSARRALVLNLVAEPGETAGFSVERHLHVLAQHAPGFTVHDIIIDAERVPSEREREQLRRTATMLQAE 284
****************************************************778999999999999988887777666665554 PP
Or compare VIMSS33195 to CDD or PaperBLAST