VIMSS81550 has 379 amino acids
Query: CofD [M=290]
Accession: PF01933.22
Description: 2-phospho-L-lactate transferase CofD
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-62 197.2 0.0 2.2e-62 196.9 0.0 1.0 1 VIMSS81550
Domain annotation for each sequence (and alignments):
>> VIMSS81550
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 196.9 0.0 2.2e-62 2.2e-62 1 253 [. 49 342 .. 49 353 .. 0.91
Alignments for each domain:
== domain 1 score: 196.9 bits; conditional E-value: 2.2e-62
CofD 1 ivvigGGtGlsklLrgLkkyt.................aeitaivtvaDdggssGrlreelgllppgDirnvlvaL...adeek..........lleeL 69
++v+ GG+G++ +L g++++ +e+ta+v+++Dd +++G l++++D+++++++L +d ++ ++eeL
VIMSS81550 49 VTVLVGGVGGAHFLLGVQQLLglgqfgpqqcpdtlttgHELTAVVNIGDDAWIHG-------LRVCPDLDTCMYTLgdgIDPQRgwghrdetwhAKEEL 140
89*****************************************************.......**************999888889999*********** PP
CofD 70 fqyrfkg......dgdlaghslgnllLaalaeitg.dleeaiealskvlavrgkvlPatdepvelhaeledgtv.....ve.geskiseakk.aeakik 154
++y + d+dla+h++++++L+a g +l+++++al++++++ ++++Pa+d+++e+h++++d ++ +e+++ ++ a+++++
VIMSS81550 141 ARYGVQPdwfelgDRDLATHLVRTQMLNA-----GyRLSQITTALCDRWQPGARLVPASDDRCETHVVITDPINdsrraIHfQEWWV---RYrAQVPTH 231
***6655**********************.....99*********************************7755555666********...555679*** PP
CofD 155 r.vflepedakalpevleaieeAdlivlgPGslytSilPnLlvpgiaealreskakvvyvsnimtqpGetdgytvsdhvkailehlg..........kg 242
+ ++++e+a+a+ e+++ai++Ad+i+++P+++++Si+++L++pgi+ alr+++a+vv s+i+ g++++++++++l+ +g +
VIMSS81550 232 SfAYVGAEKASAATEAVAAIADADVILVAPSNPVVSIGAILAIPGIRGALRTTTAPVVGYSPIID------GKPLRGMADKCLTVIGvqstatavgqH- 323
*9**************************************************************8......****************87776666540. PP
CofD 243 y........idavlvntee 253
y +d +lv++++
VIMSS81550 324 YgarrttgiLDCWLVHEDD 342
144444555******9884 PP
Or compare VIMSS81550 to CDD or PaperBLAST