PaperBLAST – Find papers about a protein or its homologs

 

Align metacyc::MONOMER-21051 to PF01933 (CofD)

metacyc::MONOMER-21051 has 328 amino acids

Query:       CofD  [M=290]
Accession:   PF01933.22
Description: 2-phospho-L-lactate transferase CofD
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence               Description
    ------- ------ -----    ------- ------ -----   ---- --  --------               -----------
    1.5e-49  154.7   0.0    2.5e-49  154.0   0.0    1.3  1  metacyc::MONOMER-21051  


Domain annotation for each sequence (and alignments):
>> metacyc::MONOMER-21051  
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  154.0   0.0   2.5e-49   2.5e-49       2     263 ..       5     283 ..       4     304 .. 0.89

  Alignments for each domain:
  == domain 1  score: 154.0 bits;  conditional E-value: 2.5e-49
                    CofD   2 vvigGGtGlsklLrgLkkyt..aeitaivtvaDdggssGrlreelgllppgDirnvlvaLadeek.............lleeLfqyr 73 
                             v+++GG+G++kl  gL ++   +e+t++v+++Dd+++ G       ll+++D+++v+++Lad  +               e+L+++ 
  metacyc::MONOMER-21051   5 VALCGGVGGAKLAYGLAQVLsaDELTIVVNTGDDFEHLG-------LLICPDLDTVVYTLADVADakkgwgraneswsSQEALARL- 83 
                             89*****************9999****************.......**************77777677999999999877778777. PP

                    CofD  74 fkg........dgdlaghslgnllLaalaeitg.dleeaiealskvlavrgkvlPatdepvelhaeledgtvvegeskiseakkaea 151
                               g        d+dla h+++  lL++     g +l +++e+++k+l v+++++P++d+pv++++e+++g+   + + +  ++++e+
  metacyc::MONOMER-21051  84 --GgpvwfqlgDKDLALHLYRRSLLDG-----GaSLCDVTETIAKALGVKHSIVPMSDDPVRTIVETDEGDLPFQTYFV--KRRCEP 161
                             ..458888899****************.....99*************************************777*****..44499* PP

                    CofD 152 kikr.vflepedakalpevleaieeAdl..ivlgPGslytSilPnLlvpgiaealreskakvvyvsnimtqpGetdgytvsdhvkai 235
                             +++   f +++ a+ ++   +a+++ dl  ++l+P+++++Si+P+L++pg+++ l++ + +v++v+++++      g +v++++ ++
  metacyc::MONOMER-21051 162 RVSGfRFEGASLARLSSPFEAALSTPDLagVILCPSNPFVSIGPILALPGVRDRLHACNVPVLAVAPLVG------GEAVKGPLTKM 242
                             ****99**********************9*****************************************......99999999999 PP

                    CofD 236 lehlg............kgyidavlvnte.eipeellekya 263
                             +++lg            ++++d ++++   e +++ll+k++
  metacyc::MONOMER-21051 243 MHELGmsvsvgeiaslyADFLDLLVIDPLdECDHDLLRKDR 283
                             99999665555444333335999999865466666666655 PP



Or compare metacyc::MONOMER-21051 to CDD or PaperBLAST