NP_001150283.1 has 320 amino acids
Query: DUF92 [M=251]
Accession: PF01940.20
Description: Integral membrane protein DUF92
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2e-62 196.9 15.5 2.5e-62 196.5 15.5 1.1 1 NP_001150283.1
Domain annotation for each sequence (and alignments):
>> NP_001150283.1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 196.5 15.5 2.5e-62 2.5e-62 3 251 .] 83 305 .. 81 305 .. 0.93
Alignments for each domain:
== domain 1 score: 196.5 bits; conditional E-value: 2.5e-62
DUF92 3 alllaalayrkksltlsGalaavlvgvlillaplglaffllllvFfllgsllTkvkkeeKekaglaeekegaRdavqVlanglvalllallyall 97
a+++ + l++sG++aa l+g+l++ a +g ++fll++++f++g+++Tk++ ++Ke++g+ae+++g+R++ V++++++++++all++ +
NP_001150283.1 83 AVFVSGSPLLLSGLSASGFAAAYLLGTLTWRA-FGAQGFLLVVAYFVVGTAVTKLRIRQKEALGVAEKRGGRRGPGSVIGSSAAGCVCALLSI-Y 175
6677777788899*******************.999*******************************************************74.5 PP
DUF92 98 eskellaelssllllgfvaslaaalaDTlaSElGkllskkprlittlkkvppGtnGgVsllGtlagllGalliallallllllakqlklillvtl 192
++ + +s+l+ lgfvas++++l+DT++SE+Gk+++++++l+ttlk vp+Gt+G++s++Gt+ag+l+++++a +++ll++ +++ ++l++l
NP_001150283.1 176 HAGGTA--SSELWRLGFVASFCTKLSDTVSSEIGKAFGRTTYLVTTLKVVPRGTEGAISIEGTIAGILASVFLAGAGYLLGQV--DVSQVVLCVL 266
544444..57899***************************************************************9988854..699******* PP
DUF92 193 aGllGsllDSllGAtlqasvvdketgkvvekkvkesrkisGldlldNeaVNllstllga 251
a +++ ++S++GAtlq + +G+++l+N+ VN+l+ +ga
NP_001150283.1 267 ASQIANYVESYIGATLQDK--------------------EGFEWLNNDIVNVLNISIGA 305
*******************....................8**************99876 PP
Or compare NP_001150283.1 to CDD or PaperBLAST