VIMSS1108871 has 451 amino acids
Query: DUF92 [M=251]
Accession: PF01940.20
Description: Integral membrane protein DUF92
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
7.9e-67 211.3 17.5 7.9e-67 211.3 17.5 2.5 2 VIMSS1108871
Domain annotation for each sequence (and alignments):
>> VIMSS1108871
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 1.5 4.4 0.0085 0.0085 25 118 .. 74 174 .. 63 181 .. 0.59
2 ! 211.3 17.5 7.9e-67 7.9e-67 2 251 .] 221 440 .. 220 440 .. 0.94
Alignments for each domain:
== domain 1 score: 1.5 bits; conditional E-value: 0.0085
DUF92 25 vlvgvlillaplglaffllllvFfllgsllTkvkkeeKek...aglaeekegaRdavqVlanglvalllallyalle....skellaelssllllgf 114
++v v+ +++ + f+++l++F +++ k +e + +l ++R+ ++++++al +a ++++ + +++l +++ ++++++
VIMSS1108871 74 LFVSVISGSFSYTYPFYIVLAAFAIAAVGNHKTSFSETDSvpdSSLRRRTIKKRSFSILWSSAFLALRIAAAFFAASwivyWQKLPVSYNLIFFIAV 170
5566666666777788999999988655444444444442222344444456699999999999998888887655555543333323434444444 PP
DUF92 115 vasl 118
++++
VIMSS1108871 171 IGAV 174
4443 PP
== domain 2 score: 211.3 bits; conditional E-value: 7.9e-67
DUF92 2 lalllaalayrkksltlsGalaavlvgvlillaplglaffllllvFfllgsllTkvkkeeKekaglaeekegaRdavqVlanglvalllallyalle 98
++++l++layr+k++++s++l+a+l+gvli+++ gl+++llll+Ff+lg +Tk+k+++Ke+ g+a++k+g R++++V++n+++al+la++y ++
VIMSS1108871 221 FSFILGVLAYRAKIADVSALLSAALLGVLIIVF-SGLSWYLLLLTFFILGGGFTKYKYAYKESIGIAQAKDGIRSYENVFSNSTAALALAVAYGVFP 316
6899*****************************.999*******************************************************98555 PP
DUF92 99 skellaelssllllgfvaslaaalaDTlaSElGkllskkprlittlkkvppGtnGgVsllGtlagllGalliallallllllakqlklillvtlaGl 195
+++l +++++++++a+a++DTlaSE+G++ + +pr+ittl+ +pG++G+VsllG++a+++G+++i++la+ll+++++ + +l++t+ G+
VIMSS1108871 317 EHSLP------IIYAYMGTVATATGDTLASEIGTTAKGRPRMITTLRLSEPGVDGAVSLLGEFAAIFGSAVIGVLAYLLGISDNFILTVLITTAGGF 407
55554......89********************99988*************************************9*999988778888888888** PP
DUF92 196 lGsllDSllGAtlqasvvdketgkvvekkvkesrkisGldlldNeaVNllstllga 251
+G+++DS+lGAtlq++ ++l+N++VNl++t++ga
VIMSS1108871 408 FGTNVDSFLGATLQKR-----------------------GVLSNSGVNLMATFAGA 440
****************.......................999******99999875 PP
Or compare VIMSS1108871 to CDD or PaperBLAST